New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5441654 =	46 (1.050)	3 (0.070)	3/324	NT	6.5%	coding (930/1653 nt)	PP_4780	putative Acyl‑CoA dehydrogenase
	?	AE015451	5441706 =	43 (1.040)					coding (878/1653 nt)	PP_4780	putative Acyl‑CoA dehydrogenase

TTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGC  >  AE015451/5441424‑5441882                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                     ttGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGAc                                                                                                                                                                                                                                 >  1:746443/1‑236 (MQ=255)    cacaagtggttctgctcggcgccgatgtgcgacgctttcctgaccttggcgcaaaccgaaaaaggcctgagctgcttcctgctgccgcgccaccgccccgatgacaaccgcaaccagttctatatccagcgcctgaagaacaagctgggcaacagctccaacgcctccagcgaggtggagttccgcggtgcgctggcgtggatgatcggcgaagagggacgcggcgtGCCGACCAt                                                                                                                                                                                                                              >  1:426210‑M1/228‑236 (MQ=255)      cACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCa                                                                                                                                                                                                                               >  1:467259/1‑233 (MQ=255)                 gctcggcgccgatgtgctacgctttcctgaccttggcgcaaaccgaaaaaggcctgagctgcttcctgctgccgcgccaccgccccgatgacaaccgcaaccagttctatatccagcgcctgaagaacaagctgggcaacagctccaacgcctccagcgaggtggagttccgcggtgcgctggcgtggatgatcggcgaagagggacgcggcgtGCCGACCATGCAGTCGAACCg                                                                                                                                                                                                                  >  1:427672‑M1/215‑235 (MQ=255)                 gctcggcgccgatgtgcgacgctttcctgaccttggcgcaaaccgaaaaaggcctgagctgcttcctgctgccgcgccaccgccccgatgacaaccgcaaccagttctatatccagcgcctgaagaacaagctgggcaacagctccaacgcctccagcgaggtggagttccgcggtgcgctggcgtggatgatcggcgaagagggacgcggcgtGcc                                                                                                                                                                                                                                    >  1:274714‑M1/215‑217 (MQ=255)                                                                      cccATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCAtct                                                                                                                                                                                                 >  2:564348/1‑199 (MQ=255)                                                                         aTGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGatcat                                                                                                                                                         <  1:673673/236‑1 (MQ=255)                                                                             gcAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTc                                                                                                                                                                         >  1:661609/1‑216 (MQ=255)                                                                                       ggCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCa                                                                                                                                                 >  2:503543/1‑230 (MQ=255)                                                                                                                       cGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAg                                                                                                           >  1:691544/1‑236 (MQ=255)                                                                                                                           ctatatccagcgcctgaagaacaagctgggcaacagctccaacgcctccagcgaggtggagttccgcggtgcgctggcgtggatgatcggcgaagagggacgcggcgtGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGc                                                                                                                                                                >  1:513910‑M1/109‑179 (MQ=255)                                                                                                                                cGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGc                                                                                                                         <  2:564394/213‑1 (MQ=255)                                                                                                                                  ttCTGCATCAATGGCTGCGCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTc                                                                                                                                                                                                                        <  1:452998/116‑1 (MQ=255)                                                                                                                                   tCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAg                                                                                                >  1:368098/1‑235 (MQ=255)                                                                                                                                      gCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGCCCATGCAGTCGAACCGGGTCATGGCGACCAtctc                                                                                                                                                                                                >  2:776978/1‑136 (MQ=255)                                                                                                                                       cATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCAGGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCGCGCCGCGTCCCTCTTCGCCGATCCTCCACGc                                                                                                                                                   >  2:423961/1‑180 (MQ=255)                                                                                                                                        ctgaagaacaagctgggcaacagctccaacgcctccagcgaggtggagttccgcggtgcgctggcgtggatgatcggcgaagagggacgcggcgtGCCGACCATGCAGTCGAACCGGGGCATGGCGACCATCTcgag                                                                                                                                                                                             <  2:513908‑M1/42‑2 (MQ=255)                                                                                                                                               gctgctCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACg                                                                                                                                                    >  1:148498/1‑171 (MQ=255)                                                                                                                                                 tgctCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGgc                                                                                  <  1:598244/235‑1 (MQ=255)                                                                                                                                                      gTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGAcc                                                                                                                                                                                                                                <  1:218389/88‑1 (MQ=255)                                                                                                                                                      gTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGAcc                                                                                                                                                                                                                                >  2:218387/1‑88 (MQ=255)                                                                                                                                                          aGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGAtata                                                                        <  1:503545/236‑1 (MQ=255)                                                                                                                                                                    cgccgACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTgg                                                                 >  2:682211/1‑233 (MQ=255)                                                                                                                                                                     gccgACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGGTCTTCAGGCGCTGGATATAGAACTGGt                                                                >  2:734760/1‑233 (MQ=255)                                                                                                                                                                            ttGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGtg                                                      >  2:566280/1‑235 (MQ=255)                                                                                                                                                                                    cgcgcAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCg                                                            <  2:368096/222‑1 (MQ=255)                                                                                                                                                                                     gcgcAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGc                                                             <  1:519000/220‑1 (MQ=255)                                                                                                                                                                                       gcAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCCGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCa                                                                                     >  1:52385/1‑194 (MQ=255)                                                                                                                                                                                        cAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTg                                          >  1:519855/1‑236 (MQ=255)                                                                                                                                                                                         aaTGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTg                                                                                                              >  1:553061/1‑167 (MQ=255)                                                                                                                                                                                          ctgggggGCCGCCGGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGc                                                                                                                                                                <  2:75060/115‑1 (MQ=255)                                                                                                                                                                                                 gccgccTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCCTgg                                                                                                                                                                                                          >  2:35793/1‑67 (MQ=255)                                                                                                                                                                                                      cagCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGttct                                                                                        <  1:779700/174‑1 (MQ=255)                                                                                                                                                                                                      cTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGa                            >  1:698088/1‑236 (MQ=255)                                                                                                                                                                                                        gCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGaa                           >  1:362539/1‑235 (MQ=255)                                                                                                                                                                                                        gCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGCTGTCATCGGGGCGGTGGCGCGGCAGCCGGAag                          >  1:138276/1‑236 (MQ=255)                                                                                                                                                                                                          gTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACGATCTCGATGATGGTCGGCACGCCGCGTCCCGCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGcc                                                                                                   >  2:764096/1‑161 (MQ=255)                                                                                                                                                                                                          gTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGgc                                                                                  <  1:517316/178‑1 (MQ=255)                                                                                                                                                                                                          gTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGgc                                                                                  >  2:517314/1‑178 (MQ=255)                                                                                                                                                                                                           tCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGcagcagctgtctc                       >  1:171414/1‑229 (MQ=255)                                                                                                                                                                                                              aCGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCt                     >  1:441757/1‑235 (MQ=255)                                                                                                                                                                                                                gCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCCGCGCACCGCGGAACTCCACCTCGCt                                                                                                                        >  2:223363/1‑134 (MQ=255)                                                                                                                                                                                                                     gcgcATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCtt             <  1:682213/236‑1 (MQ=255)                                                                                                                                                                                                                      cgcATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGgca                                  >  2:508136/1‑214 (MQ=255)                                                                                                                                                                                                                        cATCCGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGAtata                                                                        <  2:9410/174‑1 (MQ=255)                                                                                                                                                                                                                        cATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGgc                                                                                  >  2:466298/1‑164 (MQ=255)                                                                                                                                                                                                                        cATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGgc                                                                                  <  1:466300/164‑1 (MQ=255)                                                                                                                                                                                                                        cATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAagcag                       >  2:801234/1‑223 (MQ=255)                                                                                                                                                                                                                          tgaaggcgcTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAg                                                                                    <  2:23243/155‑1 (MQ=255)                                                                                                                                                                                                                           cAGTGCGCGGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTGCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGgc                                                                                  <  2:56930/161‑1 (MQ=255)                                                                                                                                                                                                                               gcgcTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCgg                                            <  2:171412/195‑1 (MQ=255)                                                                                                                                                                                                                                   tGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTgc  <  2:441755/233‑1 (MQ=255)                                                                                                                                                                                                                                      gGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCa                                                                                                                               >  2:404046‑M1/2‑105 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                     TTGCCCACCGCCGTGACCAGCCGGGCAAAATGCGCCTGTTGCGGGTCGTCCAGTTGCTCCAGCGCCTGGCCCATGCGCAAGCTCAGGGCGAGCGCAGCCTCGCTTTCCAGGGCCAGGTCGGCCAGCACGTTCTGCATCAATGGCTGCTCGTTCAGCACCCGCCCGCCGACCTTGCGATGCGCGCAATGGTGGGCCGCCTGCGTCAACGCCTGGCGCATCAGTGCGCTGGAGCCGACCATGCAGTCGAACCGGGTCATGGCGACCATCTCGATGATGGTCGGCACGCCGCGTCCCTCTTCGCCGATCATCCACGCCAGCGCACCGCGGAACTCCACCTCGCTGGAGGCGTTGGAGCTGTTGCCCAGCTTGTTCTTCAGGCGCTGGATATAGAACTGGTTGCGGTTGTCATCGGGGCGGTGGCGCGGCAGCAGGAAGCAGCTCAGGCCTTTTTCGGTTTGC  >  AE015451/5441424‑5441882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.