New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5446067	45 (1.030)	3 (0.070)	3/328	NT	6.6%	coding (212/624 nt)	thiE	Thiamine‑phosphate synthase
	?	AE015451	= 5446087	42 (1.000)					coding (232/624 nt)	thiE	Thiamine‑phosphate synthase

AATGAAGCTACGCGGTCTGTACGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGC  >  AE015451/5445855‑5446301                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           aaTGAAGCTACGCGGTCTGTACGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGtcg                                                                                                                                                                                                                     >  1:230772‑M2/1‑233 (MQ=255)         tACGCGGTCTGTACGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTg                                                                                                                                                                                                                            >  1:304575/1‑221 (MQ=255)          aCGCGGTCTGTACGCCATCACCGACAGCTAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTggg                                                                                                                                                                                                                          <  1:605108/222‑1 (MQ=255)              ggTCTGTACGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTggg                                                                                                                                                                                                        >  1:697576/1‑236 (MQ=255)                   gTACGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGcc                                                                                                                                                                                                      >  2:494798/1‑233 (MQ=255)                     aCGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTg                                                                                                                                                                                                                                        >  2:699492/1‑197 (MQ=255)                     aCGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTgg                                                                                                                                                                                                                           <  2:399070/210‑1 (MQ=255)                         cATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGAc                                                                                                                                                                                              <  1:352765/235‑1 (MQ=255)                             aCCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAAc                                                                                                                                                                                                                                          >  1:382481/1‑187 (MQ=255)                             aCCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGtcggcggt                                                                                                                                                                                                                <  2:691760‑M2/213‑9 (MQ=255)                             aCCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGcc                                                                                                                                                                                          >  1:636109/1‑235 (MQ=255)                             aCCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGGCGGCGTGCACCTGGGCCAGACCGACGGccc                                                                                                                                                                                         >  1:399397/1‑236 (MQ=255)                                         ctgctCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGccgcccag                                                                                                                                                                                                                               <  2:755525/186‑3 (MQ=255)                                           gctCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGc                                                                                                                                                                                       >  1:35744/1‑224 (MQ=255)                                                                gcaTGTCGACGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGtcggcgtcatcgttgatca                                                                                                                                                                                                     >  2:483430‑M2/2‑170 (MQ=255)                                                                       gAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGa                                                                                                                                                                                               >  1:543377/1‑188 (MQ=255)                                                                           cggcCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGc                                                                                                                                                                  >  1:558846/1‑213 (MQ=255)                                                                             gcCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGtcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttc                                                                                                                                                          <  2:753388‑M2/219‑63 (MQ=255)                                                                             gcCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGtcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttc                                                                                                                                                          >  1:753390‑M2/1‑157 (MQ=255)                                                                             gcCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCcgcg                                                                                                                                                                        >  1:880/1‑205 (MQ=255)                                                                                 tGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGCCCCGCTGACCCCGGCCCGCGCa                                                                                                                                                                      >  2:348593/1‑203 (MQ=255)                                                                                       gcggcgTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCa                                                                                                                                <  1:748245/235‑1 (MQ=255)                                                                                           cgTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGcc                                                                                                                            >  1:651940/1‑235 (MQ=255)                                                                                                 tCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGAc                                                                                                                                                                                   <  1:277239/174‑1 (MQ=255)                                                                                                     ctgcAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCt                                                                                                                                                                 <  2:582286/188‑1 (MQ=255)                                                                                                           tACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGccgcccg                                                                                                                                                                                                                                <  1:631200/119‑1 (MQ=255)                                                                                                           tACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGccgcccg                                                                                                                                                                                                                                >  2:631198/1‑119 (MQ=255)                                                                                                            aCCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGgccgcc                                                                                                          >  1:468951/1‑236 (MQ=255)                                                                                                              cgcgACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAat                                                                                                                                                  <  2:3242/194‑1 (MQ=255)                                                                                                                cgACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGgccgcctcg                                                                                                       <  1:615136/235‑4 (MQ=255)                                                                                                                        ccGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCCGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAg                                                                                               >  1:56433/1‑235 (MQ=255)                                                                                                                          gacgaTGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGtcggcg                                                                                                                                                                                                                  <  2:400086‑M2/118‑7 (MQ=255)                                                                                                                                 ctgcGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGgcg                                                                                       <  1:770914/234‑1 (MQ=255)                                                                                                                                         cgccTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAg                                                                                                       >  1:275457/1‑210 (MQ=255)                                                                                                                                          gccTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGc                                                                                                                                                             <  1:164604/155‑1 (MQ=255)                                                                                                                                          gccTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCa                                                                                                                                                        >  2:775180/1‑160 (MQ=255)                                                                                                                                               cGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGcc                                                                                                                                                                                          <  2:667289/121‑1 (MQ=255)                                                                                                                                               cGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGcc                                                                                                                                                                                          >  1:667291/1‑121 (MQ=255)                                                                                                                                               cGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCt                                                                        <  1:682195/235‑1 (MQ=255)                                                                                                                                                 tGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGCCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGCCCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCt                                                                                                                                          <  2:786886/167‑1 (MQ=255)                                                                                                                                                   aaGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGc                                                                   <  1:731158/236‑1 (MQ=255)                                                                                                                                                        gAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAcacccaggcgggcggccagttcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttcggcttcacgcaggcggcgcgcagcatcgtcggtcttgtcgcggtactgcagcagacacacgccgccttccagggc                                                                               <  2:753388‑M1/219‑158 (MQ=255)                                                                                                                                                        gAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAcacccaggcgggcggccagttcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttcggcttcacgcaggcggcgcgcagcatcgtcggtcttgtcgcggtactgcagcagacacacgccgccttccagggc                                                                               >  1:753390‑M1/1‑62 (MQ=255)                                                                                                                                                                   gaAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACCTGGc                                                                          >  1:129647/1‑213 (MQ=255)                                                                                                                                                                         ctGCGAGCGTTACGGCACCCAGTCGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGAcccc                                                                                                                                                                                <  2:364282/105‑1 (MQ=255)                                                                                                                                                                           gCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAatc                                                                                                                                                 >  2:799836/1‑134 (MQ=255)                                                                                                                                                                              aGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGc                                                                                                                                  >  2:452915/1‑146 (MQ=255)                                                                                                                                                                              aGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCg                                        >  1:554992/1‑236 (MQ=255)                                                                                                                                                                                            cAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCTAGCCTCGAACTGGCCGccc                                                                                                         <  2:371273/157‑1 (MQ=255)                                                                                                                                                                                              gTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGc                          >  1:421582/1‑234 (MQ=255)                                                                                                                                                                                                   tGATCAACGATGACGCCGAcacccaggcgggcggccagttcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttcggcttcacgcaggcggcgcgcagcatcgtcggtcttgtcgcggtactgcagcagacacacgccgccttccagggccgcgtcgacatgc                                                                  >  2:483430‑M1/1‑19 (MQ=255)                                                                                                                                                                                                   tGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGAc                                                                                                                                                                                   <  1:155303/76‑1 (MQ=255)                                                                                                                                                                                                       cAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCCTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCg                  >  2:291610/1‑233 (MQ=255)                                                                                                                                                                                                        aaCGATGACGCCGAACTGGCCGCCCGCCTGGGTGTTGGCGTGCACCTGGGCCAGACCGACGGCCCGCGGATCCCGGCCCGCGCACCGCTCGGCCGCCCGGCAATCATCGGCCCCACCTGCCa                                                                                                                                >  1:94924/1‑122 (MQ=255)                                                                                                                                                                                                         aCGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCt              <  1:564167/235‑1 (MQ=255)                                                                                                                                                                                                            aTGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTCCGTGGccc                                                                        >  2:564165/1‑173 (MQ=255)                                                                                                                                                                                                              accgcCGAcacccaggcgggcggccagttcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttcggcttcacgcaggcggcgcgcagcatcgtcggtcttgtcgcggtactgcagcagacacacgccgccttccagggccgcctcgacatgggacaggaaacggccggcgagcagctggctgtcggt                               <  2:691760‑M1/211‑206 (MQ=255)                                                                                                                                                                                                                cGCCGAcacccaggcgggcggccagttcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttcggcttcacgcaggcggcgcgcagcatcgtc                                                                                                                            <  2:400086‑M1/118‑113 (MQ=255)                                                                                                                                                                                                                   cGAcacccaggcgggcggccagttcggcgtcatcgttgatcagcaactgggtgccgtaacgctcgcagagcttcatcagcccttcggcttcacgcaggcggcgcgcagcatcgtcggtcttgtcgcggtactgcagcagacacacgccgccttccagggccgcctcgacatgggacaggaaacggccggcgagcagctggctgtcggtgatggcgtacagaccgcgtagcttcatt   >  1:230772‑M1/1‑3 (MQ=255)                                                                                                                                                                                                                   cGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAgg   <  1:305966/236‑1 (MQ=255)                                                                                                                                                                                                                     aaCTGGCCGCCCGCCTGGGGGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGc  <  1:63376/235‑1 (MQ=255)                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           AATGAAGCTACGCGGTCTGTACGCCATCACCGACAGCCAGCTGCTCGCCGGCCGTTTCCTGTCCCATGTCGAGGCGGCCCTGGAAGGCGGCGTGTGTCTGCTGCAGTACCGCGACAAGACCGACGATGCTGCGCGCCGCCTGCGTGAAGCCGAAGGGCTGATGAAGCTCTGCGAGCGTTACGGCACCCAGTTGCTGATCAACGATGACGCCGAACTGGCCGCCCGCCTGGGTGTCGGCGTGCACCTGGGCCAGACCGACGGCCCGCTGACCCCGGCCCGCGCACTGCTCGGCCGTCAGGCAATCATCGGCTCCACCTGCCACGCCAGCCTCGAACTGGCCGCCCAGGCTGCCAGCGAAGGCGCCAGCTACGTGGCCTTTGGCCGCTTCTTCAATTCTGTCACCAAGCCGGGCGCGCCCGCTGCCAACGTCGGCCTGCTCGAGCAGGC  >  AE015451/5445855‑5446301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.