New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	160025 =	21 (0.480)	3 (0.070)	3/326	NT	12.8%	coding (364/1956 nt)	PP_0149	conserved exported protein of unknown function
	?	AE015451	160058 =	21 (0.500)					coding (331/1956 nt)	PP_0149	conserved exported protein of unknown function

ACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAG  >  AE015451/159826‑160292                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           aCGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCAt                                                                                                                                                                                                                                          >  1:637806/1‑235 (MQ=255)              aCCCGGCCCGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCAtgtg                                                                                                                                                                                                                                       <  1:172455/225‑1 (MQ=255)                                        tcgtcgCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGcgg                                                                                                                                                                                                                                  <  1:166992/204‑1 (MQ=255)                                                                              gCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGt                                                                                                                                                              <  2:500727/234‑1 (MQ=255)                                                                                                                   tGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCAt                                                                                                                       >  1:529712/1‑236 (MQ=255)                                                                                                                              gCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGGTGAGCTCGAGGGCGGATAGc                                                                                                                                                       >  2:716345/1‑193 (MQ=255)                                                                                                                                   tcaaccgccgcttgctgcccagcctcgccgatggcagcgccgccgctaagcgcaccgaccgcccacatggcacggtgcgtgaagagctgctggccaccgtgcCATGTGGGCGGTCGGTGCGCTTAgcggcgg                                                                                                                                                                                                               <  2:534673‑M2/30‑1 (MQ=255)                                                                                                                                   tcaaccgccgcttgctgcccagcctcgccgatggcagcgccgccgctaagcgcaccgaccgcccacatggcacggtgcgtgaagagctgctggccaccgtgcCATGTGGGCGGTCGGTGCGCTTAgcggcgg                                                                                                                                                                                                               >  1:534675‑M2/103‑132 (MQ=255)                                                                                                                                                  aaggcacgcTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGcggcggg                                                                                                                                                                           >  2:598938/7‑152 (MQ=255)                                                                                                                                                   ttCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCg                                                                                                                                                                   <  1:730863/160‑1 (MQ=255)                                                                                                                                                       gcgcTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGAccc                                                                                                   <  1:583901/220‑1 (MQ=255)                                                                                                                                                          cTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATc                                                                                                                                                                                                     >  1:493376/1‑119 (MQ=255)                                                                                                                                                          cTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGAtgcctgc                                                                                                                                           <  1:2125/177‑1 (MQ=255)                                                                                                                                                                 acaGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCa                                                                                    <  1:80429/225‑1 (MQ=255)                                                                                                                                                                          ccgccgctaagcgcaccgaccgcccacatgGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGa                                                                                                                                                                        >  1:534675‑M1/31‑132 (MQ=255)                                                                                                                                                                          ccgccgctaagcgcaccgaccgcccacatgGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGa                                                                                                                                                                        <  2:534673‑M1/102‑1 (MQ=255)                                                                                                                                                                           aCGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCAGGGCAGCAAGCGGCGGTTGAGCTCGGGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGGAGGCCtgtttt                                                                                                                  >  2:763566/1‑183 (MQ=255)                                                                                                                                                                                    gagaTGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGATCTTCACGCACCGTGCCACGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCCGCCATCGGCGAGGCGGGGCAGCAGGCGGCGGGTGa                                                                                                                                                                        >  2:465854/1‑122 (MQ=255)                                                                                                                                                                                        tGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCa                                                   <  1:487591/235‑1 (MQ=255)                                                                                                                                                                                          ggTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGGTGAGcg                                                                                                                                                                     >  1:240771/1‑118 (MQ=255)                                                                                                                                                                                                 tCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAgggcgg                                                                                                                                                                                          >  2:197131/1‑87 (MQ=255)                                                                                                                                                                                                                 ccAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCg                                                                                                                                                                   <  1:758533/98‑1 (MQ=255)                                                                                                                                                                                                                 ccAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTg                                                                         >  2:480113/1‑188 (MQ=255)                                                                                                                                                                                                                 ccAGCAGCTCTTCACGCACCGTGCCATGTGGGAGCTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCtag                                                                                                                                                                   >  2:758531/1‑96 (MQ=255)                                                                                                                                                                                                                  tgaagagctgctggccaccgtgcCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAgctgcggc                                                                                                                                                                           >  1:177466‑M2/24‑88 (MQ=255)                                                                                                                                                                                                                    gcagcTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGcgcg                                                                  <  2:571800/192‑1 (MQ=255)                                                                                                                                                                                                                           ttCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGG‑‑GGATAGCAGTGATGCCTGCCCATAGGCGGCGGCAGGCATGTTGTCGCt                                                                                                              >  2:308088/1‑139 (MQ=255)                                                                                                                                                                                                                              aCGCGCCGTGCCGTGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCGGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCtcgtc                                         <  2:244520/207‑1 (MQ=255)                                                                                                                                                                                                                              aCGCGCCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCAtg                                                                                                                      <  2:165009/130‑1 (MQ=255)                                                                                                                                                                                                                              aCGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAg                         <  2:529710/223‑1 (MQ=255)                                                                                                                                                                                                                                      tgcCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCtcgtc                                         <  2:316885‑M2/196‑1 (MQ=255)                                                                                                                                                                                                                                        cCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAg  >  1:328065‑M2/2‑236 (MQ=255)                                                                                                                                                                                                                                        cCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGGTGAGCTCGGGGGGGGGTAGCagg                                                                                                                                                    >  1:126697‑M2/2‑89 (MQ=255)                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                           ACGTACTGCTGCCACCCGGCCAGGTCGAGCAGGCGTGGGTCGTCGCTCAGGGTGAAGCGGCGCTCGGCCTGCCCGCGGCATTCTTCCGGCAGGCCGACCTTGCCCAGCGTGCCTTGCTGGCGTTTGCAGCGTGCAATCAGCGCATTTTCGGCGCTGGGCCACAGGCGGGCACGGTCGTAGAGATGGGTGAGCTCGTGCAGCACGGTGGCCAGCAGCTCTTCACGCACCGTGCCATGTGGGCGGTCGGTGCGCTTAGCGGCGGCGCTGCCATCGGCGAGGCTGGGCAGCAAGCGGCGGTTGAGCTCGAGGGTGGATAGCAGTGATGCCTGCCCATAGGCGTCGGCAGGCATGTTGTCGCTCCAGCTGACCCGCACGCGGCGGTCCAGCTGTTGCTTGAAGCGCGGTGGCAGCTTGCCCATGGCCTCGTCGAGCAGGGCTTGGGAGGCTTTAGTTTGTTGTGGGTCGAG  >  AE015451/159826‑160292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.