New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 811732 =43 (0.980)3 (0.070) 3/322 NT 6.5% coding (520/918 nt) PP_0698 Transcriptional regulator, LysR family
?AE015451 811872 = 46 (1.120)coding (380/918 nt) PP_0698 Transcriptional regulator, LysR family

AGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAAT  >  AE015451/811639‑812080
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                 
aGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCt                                                                                                                                                                                                                 <  1:589779/236‑1 (MQ=255)
      gcgcCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAg                                                                                                                                                                                                            >  1:488582/1‑235 (MQ=255)
                gCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAAc                                                                                                                                                                                                     <  2:660074/232‑1 (MQ=255)
                       aGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCggg                                                                                                                                                                                         <  1:491086/236‑1 (MQ=255)
                                  ggTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCAt                                                                                                                                                                              >  1:451050/1‑236 (MQ=255)
                                  ggTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGCCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCCACCAGGTGCaa                                                                                                                                                                                                      >  1:101891/1‑213 (MQ=255)
                                                           gtgCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGgtgggtgg                                                                                                                                                                                 >  1:398788/1‑208 (MQ=255)
                                                             gCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATcag                                                                                                                                                     >  1:377195/1‑234 (MQ=255)
                                                               tgtgCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGaa                                                                                                                                                                                                 <  1:366156/189‑1 (MQ=255)
                                                                gtgCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATcagccagc                                                                                                                                                >  1:800081/1‑236 (MQ=255)
                                                                    agcagcCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCg                                                                                                                                                                                           >  1:25704/1‑189 (MQ=255)
                                                                      gaccttcagttgcacctggtagcCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCaa                                                                                                                                                                                                      <  1:503105‑M1/154‑1 (MQ=255)
                                                                       agcCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCgg                                                                                                                                                                                                                   <  2:101890/163‑1 (MQ=255)
                                                                              ggCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGACTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCAt                                                                                                                                                                              >  1:610499/1‑192 (MQ=255)
                                                                               ttgcacctggtagccgcaggcggcccgctggacttcgcgcgcagcggtgtcgacctggcaattcgccgcgacgacttccactgggacaaccagctgtacagccagaaaatctgcgatgaatggatcggcccggtgtgccaccccgccgcctgcgGCTACCAGGTGCAACTGAAGGTc                                                                                                                                                                                             <  1:503105‑M2/23‑1 (MQ=255)
                                                                                        tCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTc                                                                                                                                                                                             <  2:273752/168‑1 (MQ=255)
                                                                                            gcgcAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCAGCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGAcag                                                                                                                    <  1:674484/236‑1 (MQ=255)
                                                                                               CAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGGCCAGCGGGCCGCCTGCGGCCACCAGGTGCAACTGAAGGGCGGGGTGGGTGGCATGGAAGCGCGGCAGGCgggggg                                                                                                                                                         <  2:193093‑M1/196‑2 (MQ=255)
                                                                                                    GGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATcag                                                                                                                                                     <  2:337037‑M1/195‑1 (MQ=255)
                                                                                                    GGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGGTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGGGGGTGGCATGGAAgcgc                                                                                                                                                                      <  2:634815‑M1/178‑1 (MQ=255)
                                                                                                     gcccgctggacttcgcgcgcagcggtgtcgacctggcaattcgccgcgacgacttccactgggacaaccagctgtacagccagaaaatctgcgatgaatggatcggcccggtgtgccaccccgccgcctgcgGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGc                                                                                                                                         >  1:639489‑M2/133‑206 (MQ=255)
                                                                                                               acacCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAgcgc                                                                                                                                              >  1:778035/1‑191 (MQ=255)
                                                                                                               acacCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGa                                                                                                 >  1:475189/1‑236 (MQ=255)
                                                                                                                   gcgcgcagcggtgtcgccctggcaatgcgccgcgacgacttccactgggacaaccagctgtacagccagaaaatctgcgatgaatggatcggcccggtgtgccaccccgccgcctgcgGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAg                                                                                                                                                                 <  1:227565‑M2/50‑1 (MQ=255)
                                                                                                                      gCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGCAGGTCgg                                                                                                                                                                                          >  2:263827/1‑140 (MQ=255)
                                                                                                                      gCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCttgtt                                                                                          >  1:634050/1‑236 (MQ=255)
                                                                                                                        cGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCTAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCtcgttg                                                                                         >  2:271625/1‑235 (MQ=255)
                                                                                                                        cGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCaa                                                                                                                                                                                                      <  1:655672/127‑1 (MQ=255)
                                                                                                                        cGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCaa                                                                                                                                                                                                      >  2:655670/1‑127 (MQ=255)
                                                                                                                        cGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGAcag                                                                                                                    <  2:424499/209‑1 (MQ=255)
                                                                                                                        cGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCg                                                                                                                                        >  1:590343/1‑188 (MQ=255)
                                                                                                                         gATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGATTTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCt                                                                                                                                                                                                                 <  2:606108/115‑1 (MQ=255)
                                                                                                                                       aGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACg                                                                         >  1:310679/1‑236 (MQ=255)
                                                                                                                                         agtttCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAg                                                                                                                                                                 <  2:20063/144‑1 (MQ=255)
                                                                                                                                          ttttCTGGCTGTGCAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGa                                                                                                                       <  2:296356/187‑1 (MQ=255)
                                                                                                                                                ggCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTc                                                                 <  1:803041/235‑1 (MQ=255)
                                                                                                                                                     tACAGCTGGTTGCCCCAGTGGAAGTCGTCGCGGCGAAGTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCaa                                                                                                                         <  1:113569/174‑1 (MQ=255)
                                                                                                                                                        aGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGAcagcaccagc                                                                                                             >  2:646138/1‑183 (MQ=255)
                                                                                                                                                          cTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTc                                                                 <  2:343964/225‑1 (MQ=255)
                                                                                                                                                                gTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCg                                                >  1:571335/1‑236 (MQ=255)
                                                                                                                                                                  cccAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGACGGTCGGGGTGGGTGGCATGGACGCGCGGCAGGCGCggg                                                                                                                                                          >  2:149014/1‑128 (MQ=255)
                                                                                                                                                                  cccAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGcc                                              >  1:724780/1‑236 (MQ=255)
                                                                                                                                                                   ccAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCt                                             <  1:60075/236‑1 (MQ=255)
                                                                                                                                                                     aGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTgg                                           >  1:754714/1‑236 (MQ=255)
                                                                                                                                                                              cgtcgCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCg                                                <  1:629192/222‑1 (MQ=255)
                                                                                                                                                                               gtcgCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCAGGGCGATGGTCGGTGCGCAAGACAGCACCAGcaca                                                                                                          >  2:82272/1‑163 (MQ=255)
                                                                                                                                                                                         aTTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGCCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTtgctg                                                                                      <  1:433145/173‑1 (MQ=255)
                                                                                                                                                                                          ttGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTc                                                                 <  2:414099/193‑1 (MQ=255)
                                                                                                                                                                                               aGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGggtg                                        <  2:484640/213‑1 (MQ=255)
                                                                                                                                                                                                      cacCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCt                                                                                              <  1:190035/152‑1 (MQ=255)
                                                                                                                                                                                                           cggcgcggGAAGGCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGc                                                                                               <  2:127972/144‑1 (MQ=255)
                                                                                                                                                                                                              cgcgcgAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGGTCAGCCAGCGCATGGCGATGGTCGGGTCGCAAGACAGCACCAGCACATTGTCGCGAGCttggtg                                                                                         >  2:142256/1‑149 (MQ=255)
                                                                                                                                                                                                              cgcgcgAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAAt  >  1:580794/1‑236 (MQ=255)
                                                                                                                                                                                                              cgcgcgAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAAt  >  1:198214/1‑236 (MQ=255)
                                                                                                                                                                                                              cgcgcgAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCAGGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTcgcg                                                                                                  >  2:636246/1‑140 (MQ=255)
                                                                                                                                                                                                                   gAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGAcag                                                                                                                    <  2:466719/117‑1 (MQ=255)
                                                                                                                                                                                                                            cGGGCCGCCGGCGGCTACCAGGGGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACAGTGTCGCGAGCTTGTtgc                                                                                        <  2:52772/136‑1 (MQ=255)
                                                                                                                                                                                                                                         |                                                                                                                                                                                                                 
AGTGCCGCGCCTGTTGGCCGCTCAGGCGCAGCCAGGTGGGCCAGGCAGCAGGACGTGTGGTGCTGTGCAGCAGCCGTTGGCCATCGAGTCTGGCGCAGGCGGCGGGGTGGCACACCGGGCCGATCCATTCATCGCAGATTTTCTGGCTGTACAGCTGGTTGTCCCAGTGGAAGTCGTCGCGGCGAATTGCCAGGTCGACACCGCTGCGCGCGAAGTCCAGCGGGCCGCCTGCGGCTACCAGGTGCAACTGAAGGTCGGGGTGGGTGGCATGGAAGCGCGGCAGGCGCGGGATCAGCCAGCGCATGGCGATGGTCGGTTCGCAAGACAGCACCAGCACATTGTCGCGAGCTTGTTGCTGCAGGCGCTGCACGGCGCCTTCGAGCTGTTCGAAGATCGCCTGGGTGGTGCCTTGCAGGGCACGACCGGCGGGGGTGAGGAAAAT  >  AE015451/811639‑812080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.