New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4833372 =	43 (0.980)	6 (0.150)	5/324	NT	12.8%	coding (683/801 nt)	PP_4246	Periplasmic binding protein
	?	AE015451	4833436 =	41 (0.990)					coding (619/801 nt)	PP_4246	Periplasmic binding protein

CACGAAAATGAAGAAAAGGCACACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGCCGC  >  AE015451/4833201‑4833642                                                                                                                                                                                                                                            |                                                                                                                                                                                                               cACGAAAATGAAGAAAAGGCACACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGGTGCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCt                                                                                                                                                                                                                >  1:765921/1‑236 (MQ=255)  aCGAAAATGAAGAAAAGGCACACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCt                                                                                                                                                                                                                <  1:510524/235‑1 (MQ=255)                              ggAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCg                                                                                                                                                                                    <  1:799579/235‑1 (MQ=255)                                   gTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCt                                                                                                                                                                                                             >  2:353344/1‑205 (MQ=255)                                   gTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAgg                                                                                                                                                                              <  1:541776/236‑1 (MQ=255)                                    ttGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGt                                                                                                                                                                             <  1:318444/236‑1 (MQ=255)                                             cacGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAAcgc                                                                                                                                                                     >  1:698535/1‑235 (MQ=255)                                                   aaTTTAGTCTTGCGGTGCAGCCACTTTGATTCGGGACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCa                                                                                                                                                              <  1:345689/236‑1 (MQ=255)                                                    acgcaaccctgacctactcccacgacagcaacctgctgatggtgcaggccggccgcgccgatattgccctggtcacgcgttcctacctcagcgatttcctggcacgcaacccggcgagccgggcgccgctggtgccttcacaacgcattgaacaggtctatcaccactacgccttgctgcgcccTGCGCGCCgg                                                                                                                                                                                                       >  1:49730‑M2/185‑194 (MQ=255)                                                     tttAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGaa                                                                                                                                                                        <  2:698533/224‑1 (MQ=255)                                                          tCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAAt                                                                                                                                                                                      <  2:522742/205‑1 (MQ=255)                                                                 gTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGgcg                                                                                                                                                <  1:616814/236‑1 (MQ=255)                                                                 gTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAAGATCGgc                                                                                                                                                 >  1:394872/1‑235 (MQ=255)                                                                         aCTTTGACTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGcggccgg                                                                                                                                         <  1:211266/235‑1 (MQ=255)                                                                            ttGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCt                                                                                                                                      >  1:762310/1‑235 (MQ=255)                                                                                   cctgctgatggtgcaggccggccgcgccgatattgccctggtcacgcgttcctacctcagcgatttcctggcacgcaacccggcgagcgGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCcaggga                                                                                                                                                                                        <  1:559163‑M1/89‑3 (MQ=255)                                                                                      aCGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGcgcg                                                                                                                                              >  1:578337/1‑217 (MQ=255)                                                                                             ttgcaggccggccgcgccgatattgccctggtcacgcgttcctacctcagcgatttcctggcacgcaacccggcgagcagggcgcagctggtgccttcacaacgcattgaccaggtctatcaccactacgccttgctgcgcccTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGt                                                                                                                                                                   <  2:683097‑M2/46‑1 (MQ=255)                                                                                             gAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATcc                                                                                                                             >  1:398599/1‑226 (MQ=255)                                                                                             gAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAgg                                                                                                                        <  2:477901/232‑1 (MQ=255)                                                                                             gAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTg                                                                                                                     >  2:375005/1‑235 (MQ=255)                                                                                                               aCCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCa                                                                                                  <  1:743230/236‑1 (MQ=255)                                                                                                                atattgccctggtcacgcgttcctacctcagcgatttcctggcacgcaacccggcgagcaGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCCggg                                                                                                                                                           <  1:495314‑M1/118‑1 (MQ=255)                                                                                                                    tgcccgggtcacgcgtgcctacctcagcgatttcctggcacgcaacccggcgagcagggcgcagctggtgccttcacaacgcattgaccaggtctatcaccactacgccttgctgcgcccTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGt                                                                                                                                                                             <  2:322131‑M2/36‑1 (MQ=255)                                                                                                                      cccgggtcacgcgttcctacctcagcgatttcctggcacgcaacccggcgagcagggcgcagctggtgccttcacaacgcattgaccaggtctatcaccactacgccttgctgcgcccTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAatat                                                                                                                                                     <  1:495314‑M2/60‑1 (MQ=255)                                                                                                                           cAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGt                                                                                                                                                                   <  2:697053/159‑1 (MQ=255)                                                                                                                              acgcgttcctacctcagcgatttcctggcacgcaacccggcgagcaGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGcaa                                                                                                                                  <  2:683097‑M1/143‑2 (MQ=255)                                                                                                                                        acctcagcgatttcctggcacgcaacccggcgagcaGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGCACGCGTGACCCGGGCa                                                                                                                                                         <  2:322131‑M1/120‑1 (MQ=255)                                                                                                                                               cGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTcc                                                                  >  1:517593/1‑236 (MQ=255)                                                                                                                                                  aCGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCACGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTCACCAGGGCAATATc                                                                                                                                                    >  2:53028/1‑151 (MQ=255)                                                                                                                                                   tccctggcacgcaacccggcgagcagggcgcagctggtgccttcacaacgcattgaccaggtctatcaccactacgccttgctgcgcccCGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAgg                                                                                                                        <  1:559163‑M2/89‑1 (MQ=255)                                                                                                                                                         cTCGCCGATAGGCGCGCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCg                                                                                                                                                                                    <  2:126289/112‑1 (MQ=255)                                                                                                                                                           cGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTa                                                                                                       <  2:601229/187‑1 (MQ=255)                                                                                                                                                             ccGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTgcgc                                                                           <  1:124534/213‑1 (MQ=255)                                                                                                                                                                aTAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTa                                                                                                       <  2:394695/182‑1 (MQ=255)                                                                                                                                                                  ccggcgcgcaGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGTTCAATGCGTTGTGAAGGCACCAGCGGCGCCCGGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGt                                                                                         >  1:49730‑M1/11‑194 (MQ=255)                                                                                                                                                                  aGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTg                                                <  1:53657/235‑1 (MQ=255)                                                                                                                                                                   ggCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTgg                                               <  1:353346/235‑1 (MQ=255)                                                                                                                                                                            GGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGGTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGtgacaag                                                                                                                                                             <  2:190333‑M1/116‑4 (MQ=255)                                                                                                                                                                               CGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAgg                                                                        <  1:805595‑M1/198‑1 (MQ=255)                                                                                                                                                                                GCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAGCGCGTAGTgg                                 <  1:208805‑M1/236‑1 (MQ=255)                                                                                                                                                                                       ggCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTgg                                                                                                            >  1:542221/1‑154 (MQ=255)                                                                                                                                                                                       ggCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTgg                                                                                                            <  2:542219/154‑1 (MQ=255)                                                                                                                                                                                       ggCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGcc                            >  2:398601/1‑234 (MQ=255)                                                                                                                                                                                         cGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTg                        <  1:398603/236‑1 (MQ=255)                                                                                                                                                                                           tAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGaa                      >  1:616645/1‑236 (MQ=255)                                                                                                                                                                                                      gACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGa                                                                                                          >  2:192299/1‑141 (MQ=255)                                                                                                                                                                                                         cTGGTCAATGGGTTGTGAAGGCACCAGCTGCGCACTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGt                                                                                                                       <  2:177971/125‑1 (MQ=255)                                                                                                                                                                                                         cTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGt         <  1:375007/235‑1 (MQ=255)                                                                                                                                                                                                            gTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGt                                >  2:272929/1‑209 (MQ=255)                                                                                                                                                                                                              cAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGt                                                                                              <  2:21904/145‑1 (MQ=255)                                                                                                                                                                                                              cAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTgg                                               <  2:514461/192‑1 (MQ=255)                                                                                                                                                                                                              cAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTgg                                               >  1:514463/1‑192 (MQ=255)                                                                                                                                                                                                              cAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGc     >  2:325087/1‑234 (MQ=255)                                                                                                                                                                                                              cAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGCcg   >  1:571329/1‑236 (MQ=255)                                                                                                                                                                                                                    gTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGccag  <  1:614898/231‑3 (MQ=255)                                                                                                                                                                                                                    gTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGccag  >  2:614896/1‑229 (MQ=255)                                                                                                                                                                                                                      cccacgacgccttgctgcgcccGGCTCGCCGGGTTGCTGGCCAGGAAATCGCTGAGGTAGGAACGCGTGGCCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAgg                                                                                                                        <  2:49730‑M2/89‑1 (MQ=255)                                                                                                                                                                                                                              ccccAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGt                                                                                                                 <  2:100819/108‑1 (MQ=255)                                                                                                                                                                                                                                     tgcgcccTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGcc    >  2:527289‑M2/8‑212 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                               CACGAAAATGAAGAAAAGGCACACTGCAGGGAACGTTGCCGCAACACGGGAATTTAGTCTTGCGGTGCAGCCACTTTGATTCGGTACGGCTCGAAGATGCGCGCCAGTTCACCGCTGTCACGCAGGCCACGCAGCAGGGCAGCGAACGACTGCTCGCCGATAGGCGCCCCCGGGCGCAGCAAGGCGTAGTGGTGATAGACCTGGTCAATGCGTTGTGAAGGCACCAGCTGCGCCCTGCTCGCCGGGTTGCGTGCCAGGAAATCGCTGAGGTAGGAACGCGTGACCAGGGCAATATCGGCGCGGCCGGCCTGCACCATCAGCAGGTTGCTGTCGTGGGAGTAGGTCAGGGTTGCGTTGTATGTCTTGCGCAGGTAGTCCGGGTCAGCGTTGAAGCTGGCAAACGCGTAGTGGTAGCCGTTGAACAAGGCCAGGCGTTTGCCGC  >  AE015451/4833201‑4833642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.