New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5415514	34 (0.780)	5 (0.120)	4/318	NT	12.0%	coding (263/1392 nt)	gabP‑V	gamma‑aminobutyrate permease
	?	AE015451	= 5415639	42 (1.030)					coding (138/1392 nt)	gabP‑V	gamma‑aminobutyrate permease

ACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGC  >  AE015451/5415406‑5415870                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                        aCCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgc                                                                                                                                                                                                                                       >  1:297474‑M2/1‑234 (MQ=255)    tGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgct                                                                                                                                                                                                                                      >  1:712927‑M2/1‑231 (MQ=255)                                                gATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGCGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCg                                                                                                                                                                                         >  1:220903/1‑235 (MQ=255)                                                             aGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGCAAAGTCCGgcgc                                                                                                                                                                                     >  1:99208/1‑226 (MQ=255)                                                                         caccaGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACa                                                                                                                                                                >  1:118596/1‑235 (MQ=255)                                                                              gTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTTGGCCGGCTGCCGCGATGGCATGGCCag                                                                                                                                                                                                          >  2:87409/1‑188 (MQ=255)                                                                                         cGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCCTCGTTacgtgacgt                                                                                                                                               >  1:253448/1‑236 (MQ=255)                                                                                                 gaGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGaa                                                                                                                                       <  1:173180/235‑1 (MQ=255)                                                                                                   gCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgctgggccggctataccat                                                                                                                                                                                                                      >  2:340606‑M2/1‑136 (MQ=255)                                                                                                         ccAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgctgggccggctataccatcggctggttgtactg                                                                                                                                                                                                       >  2:534497‑M2/1‑130 (MQ=255)                                                                                                         ccAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTtgtg                                                                                                                               >  1:458462/1‑236 (MQ=255)                                                                                                          cAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCGTGAAACCTtgtg                                                                                                                               >  1:175184/1‑235 (MQ=255)                                                                                                           aGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgctgggccggctataccatcggctggttgtactg                                                                                                                                                                                                       >  1:588034‑M2/1‑128 (MQ=255)                                                                                                                     ggCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAAcc                                                                                                                                    >  2:294532/1‑219 (MQ=255)                                                                                                                         tcgTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGa                                                                                                                                                                  <  1:157259/183‑1 (MQ=255)                                                                                                                              ggCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATccc                                                                                                           <  1:294534/235‑1 (MQ=255)                                                                                                                                   aGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGgt                                                                                                      >  1:81152/1‑235 (MQ=255)                                                                                                                                    gggggAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGgt                                                                                                      <  2:99207/231‑1 (MQ=255)                                                                                                                                    ggTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATccc                                                                                                           <  1:173026/229‑1 (MQ=255)                                                                                                                                             cGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGCTGCCGGCGATGGAcg                                                                                                                                                                >  2:173024/1‑166 (MQ=255)                                                                                                                                              gATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgctgggccggctataccaacggctggttgtactggtggttctgggtactggtcattcctatcgaagcattggccgccg                                                                                                                                                           >  1:422991‑M2/1‑93 (MQ=255)                                                                                                                                                   ggTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGc                                                                                                                                                              >  1:623765/1‑163 (MQ=255)                                                                                                                                                   ggTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTtc                                                                                     >  1:518192/1‑236 (MQ=255)                                                                                                                                                   ggTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTtc                                                                                     >  1:709887/1‑236 (MQ=255)                                                                                                                                                        cGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCttt                                                                                >  1:93893/1‑236 (MQ=255)                                                                                                                                                            gTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTgctgggccggctataccatcggctggttgtactggtggttctgggtactggtcattcctatcgaagcattggccgccgggcatgtgctgaacgcctggttcccgcaggtggacagct                                                                                                                    <  1:729902‑M2/196‑118 (MQ=255)                                                                                                                                                                  cACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCAGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAg                                                                                                                                                               >  2:530630/1‑147 (MQ=255)                                                                                                                                                                    cGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGAt                                                                                                                                                                     <  1:204474/139‑1 (MQ=255)                                                                                                                                                                    cGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGAt                                                                                                                                                                     >  2:204472/1‑139 (MQ=255)                                                                                                                                                                    cGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGAcaca                                                                     >  1:356998/1‑235 (MQ=255)                                                                                                                                                                    cGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCAACGGTGTTCATTGAtgttg                                                                                        >  2:797424/1‑216 (MQ=255)                                                                                                                                                                                   gCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGAtga                                                                                          <  1:260351/199‑2 (MQ=255)                                                                                                                                                                                   gCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGacac                                                                      >  2:372246/1‑219 (MQ=255)                                                                                                                                                                                    cATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACg                                                                                                        >  1:111113/1‑184 (MQ=255)                                                                                                                                                                                       gcgcATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTg                                                                          >  1:664689/1‑211 (MQ=255)                                                                                                                                                                                                cAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACg                                                                                                        >  2:260349/1‑172 (MQ=255)                                                                                                                                                                                                     ccaccaGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATAtct                                   >  1:649241/1‑236 (MQ=255)                                                                                                                                                                                                      caccaGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAgggt                                                                                                                        >  2:119487/1‑148 (MQ=255)                                                                                                                                                                                                      caccaGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGcc                                                                                                                     <  2:111112/153‑1 (MQ=255)                                                                                                                                                                                                      caccaGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCttt                                                                                <  2:93892/190‑1 (MQ=255)                                                                                                                                                                                                              tACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTtct                                                                                    <  2:694563/178‑1 (MQ=255)                                                                                                                                                                                                                ccGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGa                                                                                                                                                                  >  2:488880/1‑98 (MQ=255)                                                                                                                                                                                                                ccGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCAc                                                                                                         <  2:532139/155‑1 (MQ=255)                                                                                                                                                                                                                ccGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCAc                                                                                                         >  1:532141/1‑155 (MQ=255)                                                                                                                                                                                                                    ccACGACATAGGAAATTATGGTTGCTGGCCCGGCTGCCGCGATGGCATGGCCATAGCCGACGAAAAGTccc                                                                                                                                                                                         >  2:298672/1‑70 (MQ=255)                                                                                                                                                                                                                      aCGAAATAGGAAATTATGGTTGCTGGGCCGGCTGcc                                                                                                                                                                                                                          >  2:620118/1‑36 (MQ=255)                                                                                                                                                                                                                      aCGAAATAGGAAATTATGGTTGCTGGGCCGGCTGcc                                                                                                                                                                                                                          <  1:620120/36‑1 (MQ=255)                                                                                                                                                                                                                       cGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGt                 >  1:490910/1‑236 (MQ=255)                                                                                                                                                                                                                           aTAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCg               >  2:460683/1‑234 (MQ=255)                                                                                                                                                                                                                            tAGGAAATTATGGTGGCGGGGCGGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGGCGGCGATGGACAGCATCGTTacgtg                                                                                                                                                   <  2:8771/101‑1 (MQ=255)                                                                                                                                                                                                                              ggAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGac             <  2:356996/233‑1 (MQ=255)                                                                                                                                                                                                                                      tGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTcgc  <  1:165205/236‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                        ACCTGCGGGAACCAGGCGTTCAGCACATGCCCGGCGGCCAATGCTTCGATAGGAATGACCAGTACCCAGAACCACCAGTACAACCAGCCGATGGTATAGCCGGCCCAGCGGCCAATGGCCTGGTCGGCATAGGTGGAAAACGATCCGGTGTCGGGGTGCGCCACGGCCATTTCGCCGAGCATGCGCATGACCAGTACCACCAGGGTACCGGCCACGAAATAGGAAATTATGGTTGCTGGGCCGGCTGCCGCGATGGCATGGCCAGAGCCGACGAAAAGTCCGGCGCCGATGATGCCGGCGATGGACAGCATCGTTACGTGACGTGGCTTGAAACCTTGTGCAAGGTTGCCATCAGATCCCACGGTGTTCATTGATGTTGTTCTCTTTTTGCTGACACAAGGAAGGACGGGCAGGCGTAGGCGAAAAATATCTCCTTTGAAATCAATAAGTCGACACGTTGTTCGC  >  AE015451/5415406‑5415870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.