New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 602901634 (1.320)3 (0.130) 3/296 NT 10.1% coding (445/1494 nt) kauB 4‑guanidinobutyraldehyde dehydrogenase
?AE015451 = 6029199 22 (0.920)coding (262/1494 nt) kauB 4‑guanidinobutyraldehyde dehydrogenase

GCACGTTCAGCACGCCAGCGGGGATACCGGCCTCGATCGCCAGTTGGGCGATGCGGATGGCGGTCAGCGGCGATTTTTCGGACGGCTTGAGCACGACCGAGTTACCGGTGGCCAGTGCAGGGCCGAGTTTCCAGCAGGCCATCAGCAACGGGAAGTTCCACGGCACGATGGCACCAACCACACCCACGGGTTCGCGGGTAACCAGGCCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6028803‑6029016
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccaagctgATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGTTGGAAACGCTGGACATGGGCAAGCCGATCGGCGACTCCTCCAGCATCGACATCCCAGGTGCGGCCCAAGCCATTCACTGGACTGCCGAAGCCATCGACAAGGTCTACGACGA  <  AE015451/6029199‑6029039
                                                                                                                                                                                                                                                                                                                                                                                       
GCACGTTCAGCACGCCAGCGGGGATACCGGCCTCGATCGCCAGTTGGGCGATGCGGATGGCGGTCAGCGGCGATTTTTCGGACGGCTTGAGCACGACCGAGTTACCGGTGGCCAGTGCAGGGCCGAGTTTCCAGCAGGCCATCAGCAACGGGAAGTTCCACGGCACGATGGCACCAACCACACCCACGGGTTCGCGGGTAACCAGGCCA                                                                                                                                                                        >  2:278932/1‑209
             GCCAGCGGGGATACCGGCCTCGATCGCCAGTTGGGCGATGCGGATGGCGGTCAGCGGCGATTTTTCGGACGGCTTGAGCACGACCGAGTTACCGGTGGCCAGTGCAGGGCCGAGTTTCCAGCAGGCCATCAGCAACGGGAAGTTCCACGGCACGATGGCACCAACCACACCCACGGGTTCGCGGGTAACCAGGCCAAGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCG                                                                                                                                 >  1:199220/1‑235
                                                                CAGCGGCGATTTTTCGGACGGCTTGAGCACGACCGAGTTACCGGTGGCCAGTGCAGGGCCGAGTTTCCAGCAGGCCATCAGCAACGGGAAGTTCCACGGCACGATGGCACCAACCACACCCACGGGTTCGCGGGTAACCAGGCCAAGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGTTGGAAACGCTGGACATGGGCAAGCCGATCGGCGACTC                                                                             >  1:19989/1‑236
                                                                                               ACCGAGTTACCGGTGGCCAGTGCAGGGCCGAGTTTCCAGCAGGCCATCAGCAACGGGAAGTTCCACGGCACGATGGCACCAACCACACCCACGGGTTCGCGGGTAACCAGGCCAAGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACG                                                                                                                                    <  2:199216/150‑1
                                                                                                                                                                                                               CAAGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGTTGGAAACGCTGGACATGGGCAAGCCGATCG                                                                                    >  2:59265/1‑86
                                                                                                                                                                                                                 AGCTGATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGTTGGAAACGCTGGACATGGGCAAGCCGATCGGCGACTCCTCCAGCATCGACATCCCAGGTGCGGCCCAAGCCATTCACTGGACTGCCGAAGCCATCGACAAGGTCTACGACGA  <  1:466034/166‑1
                                                                                                                                                                                                                                                                                                                                                                                       
GCACGTTCAGCACGCCAGCGGGGATACCGGCCTCGATCGCCAGTTGGGCGATGCGGATGGCGGTCAGCGGCGATTTTTCGGACGGCTTGAGCACGACCGAGTTACCGGTGGCCAGTGCAGGGCCGAGTTTCCAGCAGGCCATCAGCAACGGGAAGTTCCACGGCACGATGGCACCAACCACACCCACGGGTTCGCGGGTAACCAGGCCAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6028803‑6029016
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccaagctgATCCGCTTCGCCGACCTGCTGCGCAAGAACGTCGAAGAGCTGGCGCTGTTGGAAACGCTGGACATGGGCAAGCCGATCGGCGACTCCTCCAGCATCGACATCCCAGGTGCGGCCCAAGCCATTCACTGGACTGCCGAAGCCATCGACAAGGTCTACGACGA  <  AE015451/6029199‑6029039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.