New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4689601 =	15 (0.580)	4 (0.170)	4/296	NT	21.6%	coding (481/1605 nt)	yejF	microcin C transporter ‑ ATP binding subunit
	?	AE015451	4689640 =	15 (0.630)					coding (520/1605 nt)	yejF	microcin C transporter ‑ ATP binding subunit

CGCGGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTC  >  AE015451/4689391‑4689831                                                                                                                                                                                                                   |                                                                                                                                                                                                                                       cgcgGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAG‑TGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGc                                                                                                                                                                                                               >  1:154073/1‑235 (MQ=255)                                        aCCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCCAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGGAATGATCGCCATGGCGCTGGCCAACGCGCCCGAGCTGCTGATTGCcg                                                                                                                                                                         >  1:222084/1‑235 (MQ=255)                                                   cccGCGGCATTGCAGCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAAt                                                                                                                                                                                                                     <  1:35433/180‑1 (MQ=255)                                                                atCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCCGCCAGCGCCAGCgggc                                                                                                                                                                                                                        >  2:86907/1‑163 (MQ=255)                                                                                             gctgcACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCATGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACg                                                                                                                                                           <  2:216550/196‑1 (MQ=255)                                                                                              ctgcACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAgctgct                                                                                                                  >  1:193832/1‑236 (MQ=255)                                                                                                        gCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTg                                                                                                        <  1:144897/236‑1 (MQ=255)                                                                                                                     ggAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAg                                                                                                                                      >  2:353457/1‑193 (MQ=255)                                                                                                                               gcgcgcACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCTCGgc                                                                                                                                                         <  2:490659/164‑1 (MQ=255)                                                                                                                                                             ggtcacatccagcgccgtggtcggctcgtcggcaatcagcagctcgggctcgttGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGCTTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAgctgct                                                                                                                  <  1:490467‑M1/119‑1 (MQ=255)                                                                                                                                                              gCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGt                                                   >  1:13542/1‑235 (MQ=255)                                                                                                                                                                     ccagcgccgtggtcggctcgtcggcaatcagcagctcgggctcgttGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGaa                                                                                                                                 <  1:376650‑M1/104‑1 (MQ=255)                                                                                                                                                                       agCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCt                                                                           <  2:193828/202‑1 (MQ=255)                                                                                                                                                                          cgcgCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGa                                                                                                                                                                <  1:15379/114‑1 (MQ=255)                                                                                                                                                                                gtcggctcgtcggcaatcagcagctcgggctcgttGGCCAGCGCCAGGGGGGAAt                                                                                                                                                                                                                     <  1:48703‑M1/20‑1 (MQ=255)                                                                                                                                                                                   gcCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCt                                                                           <  2:154069/190‑1 (MQ=255)                                                                                                                                                                                           ggcaatcagcagctcgggctcgttGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCg                                        <  1:300213‑M1/193‑1 (MQ=255)                                                                                                                                                                                                   ccACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCa                                           <  1:337719/206‑1 (MQ=255)                                                                                                                                                                                                    cACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGGGc                          >  1:212019/1‑222 (MQ=255)                                                                                                                                                                                                             gcGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGcgccg                                             <  2:278923/193‑1 (MQ=255)                                                                                                                                                                                                                ggcggcCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTc  <  1:353461/234‑1 (MQ=255)                                                                                                                                                                                                                   |                                                                                                                                                                                                                                       CGCGGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTC  >  AE015451/4689391‑4689831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.