New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4689601 =	15 (0.580)	4 (0.170)	4/296	NT	21.6%	coding (481/1605 nt)	yejF	microcin C transporter ‑ ATP binding subunit
	?	AE015451	4689640 =	15 (0.630)					coding (520/1605 nt)	yejF	microcin C transporter ‑ ATP binding subunit

ACCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTC  >  AE015451/4689430‑4689831                                                                                                                                                                                                                   |                                                                                                                                                                                                aCCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCCAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGGAATGATCGCCATGGCGCTGGCCAACGCGCCCGAGCTGCTGATTGCcg                                                                                                                                                                         >  1:222084/1‑235 (MQ=255)                  cgatgcggcgcaccaggttcaggtcatggctgatcagcaacagggccatgcccatacgcgcctgcaattccttgagcagctcgaggatcttcagctgcacggtcacatccagcgccgtggtcggctcgtcggcaatcagcagctcgggctcgttggccagcgccatggcgatcattacccgctggcgctggccAACGAGCCCGAGCTGCTGATTGcc                                                                                                                                                                          <  1:300213‑M2/24‑1 (MQ=255)                                                      gctgcACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCATGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACg                                                                                                                                                           <  2:216550/196‑1 (MQ=255)                                                       ctgcACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAgctgct                                                                                                                  >  1:193832/1‑236 (MQ=255)                                                                 gCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTg                                                                                                        <  1:144897/236‑1 (MQ=255)                                                                              ggAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAg                                                                                                                                      >  2:353457/1‑193 (MQ=255)                                                                                        gcgcgcACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCTCGgc                                                                                                                                                         <  2:490659/164‑1 (MQ=255)                                                                                            agcagctcgaggatcttcagctgcacggtcacatccagcgccgtggtcggctcgtcggcaagcagcagctcgggctcgttggccagcgccatggcgatcattacccgctggcgctggccAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGAcc                                                                                                                                            <  1:490467‑M2/54‑1 (MQ=255)                                                                                                           ttcagctgcacggtcacatccagcgccgtggtcggctcgtcggcaatcagcagctcgggctcgttggccagcgccatggcgatcattacccgctggcgctggccAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTgg                                                                                                                                                    <  1:376650‑M2/46‑1 (MQ=255)                                                                                                                      ggtcacatccagcgccgtggtcggctcgtcggcaatcagcagctcgggctcgttGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGCTTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAgctgct                                                                                                                  <  1:490467‑M1/119‑1 (MQ=255)                                                                                                                       gCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGt                                                   >  1:13542/1‑235 (MQ=255)                                                                                                                              ccagcgccgtggtcggctcgtcggcaatcagcagctcgggctcgttGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGaa                                                                                                                                 <  1:376650‑M1/104‑1 (MQ=255)                                                                                                                                agCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCt                                                                           <  2:193828/202‑1 (MQ=255)                                                                                                                                   cgcgCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGa                                                                                                                                                                <  1:15379/114‑1 (MQ=255)                                                                                                                                            gcCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCt                                                                           <  2:154069/190‑1 (MQ=255)                                                                                                                                                    ggcaatcagcagctcgggctcgttGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCg                                        <  1:300213‑M1/193‑1 (MQ=255)                                                                                                                                                            ccACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCa                                           <  1:337719/206‑1 (MQ=255)                                                                                                                                                             cACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGGGc                          >  1:212019/1‑222 (MQ=255)                                                                                                                                                                      gcGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGcgccg                                             <  2:278923/193‑1 (MQ=255)                                                                                                                                                                         ggcggcCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTc  <  1:353461/234‑1 (MQ=255)                                                                                                                                                                                    CCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGGCCACGGCGCTGGATGTGCCCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATg                                                                                      >  2:123911‑M1/1‑139 (MQ=255)                                                                                                                                                                                               attcccccctggcgctggccAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGAc                                                                                                                                                               <  1:48703‑M2/35‑1 (MQ=255)                                                                                                                                                                                                 aTCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCgtgt                            <  1:113515/184‑1 (MQ=255)                                                                                                                                                                                                                   |                                                                                                                                                                                                ACCTCGCTCAACCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGCGCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGCGGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGCGCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGATCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTC  >  AE015451/4689430‑4689831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.