New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 516759 | 26 (1.010) | 3 (0.120) | 3/306 | NT | 9.8% | coding (233/783 nt) | PP_0429 | Oxidoreductase, short chain dehydrogenase/reductase family |
? | AE015451 | = 516797 | 30 (1.210) | coding (195/783 nt) | PP_0429 | Oxidoreductase, short chain dehydrogenase/reductase family |
CCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATCATGGCGTAACGGGTCATGCAAGGCTCCTGGGGGCGGAAGAGGGCGCC > AE015451/516567‑517021 | ccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCagcgg < 1:126876‑M2/236‑6 (MQ=255) ccGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCagcg < 1:24605‑M2/235‑5 (MQ=255) tCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTgg > 1:184590/1‑236 (MQ=255) ggTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGt > 1:154642/1‑235 (MQ=255) ttACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGa > 2:331726/1‑223 (MQ=255) ttACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAg > 1:133468/1‑236 (MQ=255) tggcaCAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAAc > 1:210984/1‑214 (MQ=255) gCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGc < 1:234689/218‑1 (MQ=255) agcagATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCa > 1:186440/1‑187 (MQ=255) ttCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGc < 2:482031/216‑1 (MQ=255) aTTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCcgcg > 2:388928/1‑189 (MQ=255) aTTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGc > 1:279226/1‑235 (MQ=255) tCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCGCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGGCCGCTCGAt > 2:510970/1‑170 (MQ=255) tGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAgcg < 1:253692/235‑1 (MQ=255) cgcAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCcaggcccaggcc < 1:289418/236‑1 (MQ=255) aaGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGccaggcccaggc > 2:183126/1‑232 (MQ=255) aaGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGc < 1:394156/235‑1 (MQ=255) aaGCCCGCGCAGTTGACAAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGc > 2:282733/1‑203 (MQ=255) gCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTgg < 1:183130/236‑1 (MQ=255) cAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCGTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGc < 2:2154/164‑1 (MQ=255) cGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCagcggcgtatcgatttgctggtcaactgcgcgggcttgcgcacctatgggccgttcctggcccatgaatgggccgacgaacaggatctgctggaagtcaacgtgctggccctgag > 2:396367‑M2/1‑50 (MQ=255) cGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCagcggcgtatcgatttgctggtcaactgcgcgggcttgcgcacctatgggccgttcctggcccatgaatgggccgacgaacaggatctgctggaagtcaacgtgctggccctgag < 1:396371‑M2/165‑116 (MQ=255) aCGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATc < 1:46634/223‑1 (MQ=255) cgccgcTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCa > 1:514852/1‑216 (MQ=255) tCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGCAGCACCCGTGacc > 1:79999/1‑214 (MQ=255) gCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCagcggcgtatcgatttgctggtcaactgcgcgggcttgcgcacctatgggccgttcctggcccatgaatgggccgacgaacaggatctgctggaagtcaacgtgctggccctgagccgcctgtgccatgccatcggtaac < 2:332994‑M2/177‑141 (MQ=255) gCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATCATGGCGTAACGGGTCATGCa > 1:356425/1‑234 (MQ=255) ccAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTgg < 2:492431/192‑1 (MQ=255) ccAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTgg > 1:492435/1‑192 (MQ=255) tAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCCAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATCATGGCggcacg > 1:108862/1‑205 (MQ=255) aaGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCcaggcccaggcc < 2:221257/173‑1 (MQ=255) aGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATCATGGCGTAACGGGTCATGCAAGGCTCCTGGGGGCGGAAGAGGgc < 1:282737/235‑1 (MQ=255) ccTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCTGCGTTTCTCGTTGGCGTGCCACGAGTATCAGATGGCGCCCGCGCCGTGc > 2:442812/1‑140 (MQ=255) ccTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTgc < 2:492323/127‑1 (MQ=255) ccTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATCATGGCGTAACGGGTCATGCAAGGCTCCTGGGGGCGGAAGAGGGCGcc > 1:464339/1‑236 (MQ=255) | CCGGCCAGGCCGGCGACGTTGAGAATCTGCCCGCCACCCTGTACAGCCATCAGGTTACCGATGGCATGGCACAGGCGGCTCAGGGCCAGCACGTTGACTTCCAGCAGATCCTGTTCGTCGGCCCATTCATGGGCCAGGAACGGCCCATAGGTGCGCAAGCCCGCGCAGTTGACCAGCAAATCGATACGCCGCTCGCCTTCTTCCAGCTCTAGCACGAAGCCTGAAAGGCGCAGCGGCTGGCTGAGGTCGCAGGCGCGGAACAGCACCTCGACGCCGAAACGCTGGGTCAGCTCGATGGCAACAGGCTCCAGCGTTTCTCGTTGGCGTGCCACCAGGATCAGATTGCGCCCGCGCCGTGCCAGCGCTTCCGCCAAGGCCAGGCCCAGGCCGCTGGAAGCACCAGTGATCATGGCGTAACGGGTCATGCAAGGCTCCTGGGGGCGGAAGAGGGCGCC > AE015451/516567‑517021 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |