| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5141 | 67 (1.160) | 7 (0.130) | 6/324 | NT | 9.8% | coding (1242/1371 nt) | trmE | GTPase |
| ? | AE015451 | = 5208 | 66 (1.210) | coding (1175/1371 nt) | trmE | GTPase | |||||
GCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGCAAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4903‑5141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccgccGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCGGATTTTCTCCAGCTTCTGCATCGGCAAGTAATCCACAGCCACGCAAGGCCAAGCGCCGCTCCTTAGGGA < AE015451/5208‑4974 GCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGCAAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCCC < 1:768096/236‑1 AGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTTCGCAAT > 1:733786/1‑176 GAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGAC > 1:543953/1‑236 GTGATCTCCCCCAGCGCATGCTGTGCCTGGCGCAAGTCCTCAGCCACAACCTCTCCCGCGCCCCCC > 2:324324/1‑66 CCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCgg > 1:760870/1‑200 TGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCC > 1:555398/1‑41 TCCTCAGCCAGAAGCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGC < 2:789316/169‑1 TCCTCAGCCAGAAGCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGC > 1:789319/1‑169 TCCTCAGCCAGAAGCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGC > 2:805922/1‑150 GCTCTCCCGCGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCGGATTTTCTCCAGCTTCTGCATCGGCAAGTAATCCACAGCCACGCAAGGCCAA > 1:1037908/1‑235 ccaggGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCA < 1:219784/113‑1 CGCCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCA > 2:248485/1‑152 CCCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGCGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATG > 1:713459/1‑123 CCGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCGGATTTTCTCCAGCTTCTGCATCGGCAAGTAATCCACAGCCACGCAAGGCCAAGCGCCGCTCCTTA > 1:522141/1‑236 CGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCG > 1:1070522/1‑170 CGCCGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACA < 2:180413/116‑1 CGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCGGATTTTCTCCAGCTTCTGCATCGGCAAGTAATCCACAGCCACGCAAGGCCAAGCGCCGCTCCTTAGGGA > 1:1072330/1‑236 GCTCCCACAGGTGCTTGGGTCAGCGGCCTGCATTCATCTTCTGCAACGAATTTCAGGCAAAAAAAAGCCGCTCCCTAAGGAGCGGCGCTTGGCCTTGCGTGGCTGTGGATTACTTGCCGATGCAGAAGCTGGAGAAAATCCGCCCAAGCAGGTCATCCGAGCTGAATGCTCCTGTGATCTCCCCCAGCGCATGCTGTGCCTGGCGTAAGTCCTCAGCCAGAAGCTCTCCCGCGCCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4903‑5141‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcccgccGGCGCCATCTGGATGCCTTGCGCCAGGCCAGCGAGCACCTGGAGCACGGCCGTGCTCAATTGACCTTGGCGGGCGCGGGAGAGCTTCTGGCTGAGGACTTACGCCAGGCACAGCATGCGCTGGGGGAGATCACAGGAGCATTCAGCTCGGATGACCTGCTTGGGCGGATTTTCTCCAGCTTCTGCATCGGCAAGTAATCCACAGCCACGCAAGGCCAAGCGCCGCTCCTTAGGGA < AE015451/5208‑4974 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |