New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 106074 = | 47 (0.820) | 3 (0.050) | 3/326 | NT | 6.7% | intergenic (+148/‑60) | cynT/PP_0101 | carbonic anhydrase/putative sulfate transporter |
? | AE015451 | 106096 = | 39 (0.710) | intergenic (+170/‑38) | cynT/PP_0101 | carbonic anhydrase/putative sulfate transporter |
GGCCGCTGACCTGTAGCGGCGATCCAGCAAGGAAACCGACGACAATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/106314‑106074 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgtgCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGG > AE015451/106096‑106243 GGCCGCTGACCTGTAGCGGCGATCCAGCAAGGAAACCGACGACAATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTG < 1:919718/235‑1 GCTGACCTGTAGCGGCGATCCAGCAAGGAAACCGACGACAATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGT < 1:932344/236‑1 ACCTGTAGCGGCGATCCAGCAAGGAAACCGACGACAATGCCGCCGATAATCCCAGTAAGCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGG < 1:449703/228‑1 CGACGACACTGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCCCCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGTG < 1:144204/205‑1 GCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACCGCCATCCCCCTGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCG > 1:448178/1‑168 TTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGGCATTCCCCTGGC > 1:733098/1‑62 TGTGGAATGTGCACCGTGTTTCTCCTTTCTCTAGTCGCAGGGCCATTCCCCTGGCCGTGCGACTAGAGAAAGGAGAAGCACGGT < 2:52395/84‑1 GCCATTCCCCTGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGC < 2:448175/64‑1 CCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGG > 1:71048/1‑153 CCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGG < 2:71046/153‑1 GGCCGCTGACCTGTAGCGGCGATCCAGCAAGGAAACCGACGACAATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/106314‑106074 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgtgCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGG > AE015451/106096‑106243 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |