New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	106074 =	47 (0.820)	3 (0.050)	3/326	NT	6.7%	intergenic (+148/‑60)	cynT/PP_0101	carbonic anhydrase/putative sulfate transporter
	?	AE015451	106096 =	39 (0.710)					intergenic (+170/‑38)	cynT/PP_0101	carbonic anhydrase/putative sulfate transporter

CGCCGCCAGCGACAGCTTCCTGCCCTTGGCCGCGGGTGAACCCGTTCCCTGCGCCACTCCGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTGGGATTATCGGCGGCATTGTCGTCGGTTTCCTTGCTGGATCGCCGCTA  >  AE015451/105851‑106301                                                                                                                                                                                                                                |                                                                                                                                                                                                                                    cgccgcCAGCGACAGCTTCCTGCCCTTGGCCGCGGGTGAACCCGTTCCCTGCGCCACTCCGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACg                                                                                                                                                                                                                                  >  2:888050/1‑227 (MQ=255) cgccgcCAGCGACAGCTTCCTGCCCTTGGCCGCGGGTGAACCCGTTCCCTGCGCCACTCCGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACg                                                                                                                                                                                                                                  <  1:888053/227‑1 (MQ=255)                cTTCCTGCCCTTGGCCGCGGGTGAACCCGTTCCCTGCGCCACTCCGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAggg                                                                                                                                                                                                                           <  1:932092/219‑1 (MQ=255)                                            gtccccTGCGCCACTCCGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACAtt                                                                                                                                                                                <  2:410959/231‑1 (MQ=255)                                                            cGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGAGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGcc                                                                                                                                                              >  1:52397/1‑236 (MQ=255)                                                                 ggCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGa                                                                                                                                                                                                             >  1:885800/1‑184 (MQ=255)                                                                    cGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAAt                                                                                                                                                                                                                       <  1:442109/171‑1 (MQ=255)                                                                       tactaAGCGCCCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGt                                                                                                                                                                                                                 <  1:322815/174‑1 (MQ=255)                                                                       tactaAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACAt                                                                                                                                                                                 >  2:1081925/1‑206 (MQ=255)                                                                            ccttttgccggcggcatgccagaagcgatcgcaatgcccatgcacaacggcaaggccaccaggaagaccaccaccgacgccagcaactcacgcggcagggccgctttcaactgtgtaatgttcaccgtgtttctcctttctctagtcgCACgg                                                                                                                                                                                                                                 >  1:71048‑M1/149‑153 (MQ=255)                                                                            ccttttgccggcggcatgccagaagcgatcgcaatgcccatgcacaacggcaaggccaccaggaagaccaccaccgacgccagcaactcacgcggcagggccgctttcaactgtgtaatgttcaccgtgtttctcctttctctagtcgCACgg                                                                                                                                                                                                                                 <  2:71046‑M1/5‑1 (MQ=255)                                                                                    gTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGc                                                                                                                                                                                                               >  2:993886/1‑163 (MQ=255)                                                                                    gTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGc                                                                                                                                                                                                               <  1:993889/163‑1 (MQ=255)                                                                                    gTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGGGTGAGt                                                                                                                                                 >  2:542686/1‑225 (MQ=255)                                                                                    gTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCCTGTCCGGGGCAAACGGGCCCACGGCCCGGGGAATGGc                                                                                                                                                                                                                    >  2:322812/1‑158 (MQ=255)                                                                                    gTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTAAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGTCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGGAAGgaga                                                                                                                                                                                               >  2:596716/1‑179 (MQ=255)                                                                                            cTAGAACCTGGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCggtggtgg                                                                                                                               <  1:813700/235‑1 (MQ=255)                                                                                                   cTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTag                                                                                                                                                                                                         >  1:533203/1‑154 (MQ=255)                                                                                                    ttGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACg                                                                                                                                                                                                                                  <  2:80863/128‑1 (MQ=255)                                                                                                       aTAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCtggtgg                                                                                                                   <  1:740993/236‑1 (MQ=255)                                                                                                                   aCCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTgg                                                                                                                                           <  1:449365/200‑1 (MQ=255)                                                                                                                   aCCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTtgt                                                                                                       <  1:360268/236‑1 (MQ=255)                                                                                                                    cccTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAAt                                                                                                                                                                                                                       <  2:885797/123‑1 (MQ=255)                                                                                                                                  ggCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGa                                                                                                                                                                                     >  1:135051/1‑143 (MQ=255)                                                                                                                                    cgcgGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGTAACACGGTGCACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGt                                                                                                                                        >  2:670136/1‑186 (MQ=255)                                                                                                                                    cgcgGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGaaa                                                                                                                                                                    >  2:35739/1‑158 (MQ=255)                                                                                                                                    cgcgGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGaaa                                                                                                                                                                    <  1:35740/158‑1 (MQ=255)                                                                                                                                    cgcgGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGAt                                                                                       >  1:798045/1‑235 (MQ=255)                                                                                                                                    cgcgGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGGCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGAt                                                                                       >  1:734399/1‑235 (MQ=255)                                                                                                                                                      tGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACAtt                                                                                                                                                                                >  2:977388/1‑128 (MQ=255)                                                                                                                                                      tGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACAtt                                                                                                                                                                                <  1:977391/128‑1 (MQ=255)                                                                                                                                                             ccTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAg                                                             <  2:531527/236‑1 (MQ=255)                                                                                                                                                                gACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGgag                                                                                                                                                                                                >  2:517560/1‑102 (MQ=255)                                                                                                                                                                gACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGgag                                                                                                                                                                                                <  1:517563/102‑1 (MQ=255)                                                                                                                                                                gACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCg                                                                                     >  1:250889/1‑209 (MQ=255)                                                                                                                                                                  ctgccctgccGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGccg                                                                >  1:102287/1‑226 (MQ=255)                                                                                                                                                                        tgccGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGa                                                       >  1:865742/1‑231 (MQ=255)                                                                                                                                                                              cGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCcgcg                                                                                                                                                      >  2:805586/1‑130 (MQ=255)                                                                                                                                                                                 gCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGc                                                                                          <  2:846620/187‑1 (MQ=255)                                                                                                                                                                                 cgctttcaactgtgtaatgttcaccgtgtttctcctttctctagtcgCACGGCCAGGGGGATGGCGGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGc                                                                                                             >  1:448178‑M1/48‑168 (MQ=255)                                                                                                                                                                                  gctttcaactgtgtaatgttcaccgtgtttctcctttctctagtcgCACGGCCAGGGGAATGGc                                                                                                                                                                                                                    <  2:448175‑M1/18‑1 (MQ=255)                                                                                                                                                                                   tCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTTCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAacac                                                                                                                                                                                          <  2:54037/89‑1 (MQ=255)                                                                                                                                                                                         gcggcCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTcc                                                                                                                         <  2:247365/148‑1 (MQ=255)                                                                                                                                                                                                 ggcCTGCGCGCTAGTCAGGGGCAAACGGGCCAACGGACAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTg                                                                                                              <  1:41288/150‑1 (MQ=255)                                                                                                                                                                                                  gcCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCaaaa                                                              <  1:5166/198‑1 (MQ=255)                                                                                                                                                                                                       accgtgcttctcctttctctagtcgCACGGCCAGGGGAATGGCCCTGCGACTAGAGAAAGGAGAAACACGGTGCACATTCcaca                                                                                                                                                                           <  2:52395‑M1/59‑1 (MQ=255)                                                                                                                                                                                                          gcTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGc                                                                                          >  2:440991/1‑162 (MQ=255)                                                                                                                                                                                                          gcTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTGGGATTATCGGCGGCATTGTCGTCGGTTTCCtt                 >  1:357933/1‑235 (MQ=255)                                                                                                                                                                                                            ttGTCAGGGGCAAACATGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTg                                                                                                              >  1:104864/1‑140 (MQ=255)                                                                                                                                                                                                             tGTCGGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGAtt                                                     <  2:120281/196‑1 (MQ=255)                                                                                                                                                                                                              gTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTGGGATTATcgg                                       <  1:212766/209‑1 (MQ=255)                                                                                                                                                                                                                   gggCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGc                                                                                          <  2:1048109/153‑1 (MQ=255)                                                                                                                                                                                                                        agcGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTggg                                               <  2:223894/189‑1 (MQ=255)                                                                                                                                                                                                                         aCGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTGGGATTATCGGCGGCATTGTCGTCGGTTTCCTTGCTGGATCGCCGCTa  >  1:374293/1‑235 (MQ=255)                                                                                                                                                                                                                         aCGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCAGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGc                                                                                    >  2:412117/1‑153 (MQ=255)                                                                                                                                                                                                                                CACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGGGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTGGGATTATCGGCGGCAGTGtcgtcg                         <  1:144204‑M1/205‑1 (MQ=255)                                                                                                                                                                                                                                |                                                                                                                                                                                                                                    CGCCGCCAGCGACAGCTTCCTGCCCTTGGCCGCGGGTGAACCCGTTCCCTGCGCCACTCCGAGAGGCCGCTACTAAGCGACCCGTCCGCCGCTAGAACCTTGATAGCCGGCTGCACCCTTCAGGGGTGTGGCGCGGCCTTCGGCTGCCTTGAATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGGCAAAAGGCCTGATTACTGGGATTATCGGCGGCATTGTCGTCGGTTTCCTTGCTGGATCGCCGCTA  >  AE015451/105851‑106301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.