New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 407662	34 (0.590)	5 (0.090)	4/336	NT	12.6%	coding (343/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate
	?	AE015451	= 407678	36 (0.640)					coding (327/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate

TGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/407605‑407662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGTGGTCGAAGAAGTGCTGTGCAAGCTGGAAGACGAAGTCGGCACTGGCGACCTGAT  <  AE015451/407678‑407445                                                                                                                                                                                                                                                                                                      TGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGAGGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGCCGGCGTGCAGGACATCCACGTGCCGGACATCGGTT                                                                                                                                                                                       >  1:468797/1‑111                CCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACA                                                                                                                                                                                             >  2:762699/1‑90                 CGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCAACGAAGTGCTGGTCAAAGTCGGCGA                                                                                                                                         >  2:449593/1‑141                                           TGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGacg                                                      <  1:1014982/198‑4                                           TGTCCTGCACGCTGGCCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGacg                                                      >  2:1014979/1‑195                                                     GCTGGCCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGTGGTCGAAGAAGTGCTGTGCAAGCTGGAAGACGA                       >  2:738256/1‑219                                                         GCCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGTGGTCGAAGAAGTGCTGTGCAAGCTGGAAGACGAAGTCGGCACTGGCGACCTGAT  >  1:425070/1‑236                                                          CCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGTGGTCGAAGAAGTGCTGTGCAAGCTGGAAGACGAAGTCGGCACTGG           >  1:563759/1‑226                                                                                                                                                                                                                                                                                                      TGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/407605‑407662 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCGCAGCCCCGGCTGCTGCCAGCGTGCAGGACATCCACGTGCCGGACATCGGTTCGTCGGGCAAGGCCAAGATCATCGAAGTGCTGGTCAAAGTCGGCGACACCGTCGAAGCCGACCAGTCGCTGATTACCCTGGAGTCCGACAAGGCCTCCATGGAAATCCCGTCGCCGGCTGCCGGCGTGGTCGAAGAAGTGCTGTGCAAGCTGGAAGACGAAGTCGGCACTGGCGACCTGAT  <  AE015451/407678‑407445

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.