New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 407662	34 (0.590)	5 (0.090)	4/336	NT	12.6%	coding (343/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate
	?	AE015451	= 407678	36 (0.640)					coding (327/1641 nt)	aceF	AceF‑S‑acetyldihydrolipoate

ATCAGGTCGCCAGTGCCGACTTCGTCTTCCAGCTTGCACAGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGCTCT  >  AE015451/407445‑407910                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         aTCAGGTCGCCAGTGCCGACTTCGTCTTCCAGCTTGCACAGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGgc                                                                                                                                                                                                                                        >  1:425070‑M2/1‑234 (MQ=255)       tCGCCAGTGCCGACTTCGTCTTCCAGCTTGCACAGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCgg                                                                                                                                                                                                                                     >  2:634412/1‑233 (MQ=255)          ccAGTGCCGACTTCGTCTTCCAGCTTGCACAGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGg                                                                                                                                                                                                                                         >  1:563759‑M2/1‑225 (MQ=255)                      tCGTCTTCCAGCTTGCACAGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGgccagc                                                                                                                                                                                                                                    >  2:738256‑M2/1‑213 (MQ=255)                                      acaGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTACTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGcagcag                                                                                                                                                                                                                             >  1:118850/1‑210 (MQ=255)                                                     cgtcgccGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGgccagcgtgcaggaca                                                                                                                                                                                                                          <  1:1014982‑M2/195‑17 (MQ=255)                                                     cgtcgccGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGgccagcgtgcaggaca                                                                                                                                                                                                                          >  2:1014979‑M2/4‑182 (MQ=255)                                                     ccACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCt                                                                                                                                                                                                                     >  1:898303/1‑203 (MQ=255)                                                           cGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGgca                                                                                                                                                                              >  1:350377/1‑236 (MQ=255)                                                            ggCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAgg                                                                                                                                                                                                                            <  2:468580/189‑1 (MQ=255)                                                            ggCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAgg                                                                                                                                                                                                                            >  1:468583/1‑189 (MQ=255)                                                            ggCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGcgccg                                                                                                                                                                                               >  1:46935/1‑218 (MQ=255)                                                                      gACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgct                                                                                                                                                                                                      >  1:288573/1‑201 (MQ=255)                                                                              ttCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGGTCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTAGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCgg                                                                                                                                                                                                              >  2:944422/1‑185 (MQ=255)                                                                                        gCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCagcagc                                                                                                                                                 >  1:987471/1‑236 (MQ=255)                                                                                              tCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgctggc                                                                                                                                                                                                   <  2:605853/180‑1 (MQ=255)                                                                                              tCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGc                                                                                                                                                                                           <  1:167033/188‑1 (MQ=255)                                                                                                      cAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAgcgg                                                                                                                                               >  1:1081124/1‑224 (MQ=255)                                                                                                        gggTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTc                                                                                                                                  >  1:556884/1‑235 (MQ=255)                                                                                                                 gCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGgctggcgcgg                                                                                                                                                                                                     >  2:291629/1‑157 (MQ=255)                                                                                                                   gACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCCCGCTGGCCGCCGCCGGGGCTGCGGCCGGAGCAGCAgg                                                                                                                                                                                                                            >  2:78675/1‑134 (MQ=255)                                                                                                                   gACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACcagca                                                                                                                       >  1:158725/1‑235 (MQ=255)                                                                                                                                  aCGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCt                                                                                                                                    <  2:424492/207‑1 (MQ=255)                                                                                                                                        tCGCCGACTTTGACCAGCACTTCGTTGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGgccagcgtgcaggacatccacgtgccggacatcggttcgtcg                                                                                                                                                                                                >  2:449593‑M2/1‑99 (MQ=255)                                                                                                                                          gCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGt                                                                                               >  1:847331/1‑236 (MQ=255)                                                                                                                                                  tGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCa                                                                                         <  2:847328/234‑1 (MQ=255)                                                                                                                                                                        ggCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCa                                                                 <  1:1012094/236‑1 (MQ=255)                                                                                                                                                                         gCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCa                                                                 <  1:841134/235‑1 (MQ=255)                                                                                                                                                                           cTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCa                                                                             >  1:85632/1‑221 (MQ=255)                                                                                                                                                                                 cgacgaTCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGcc                                                         >  1:841656/1‑235 (MQ=255)                                                                                                                                                                                 cgacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCt                                                        >  1:455257/1‑236 (MQ=255)                                                                                                                                                                                 cgacgaACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCGCCGGGGCCgca                                                                                                                                                      >  2:343378/1‑142 (MQ=255)                                                                                                                                                                                      caCCGATGTCCGGCACGTGGATGCCCTGCACGCTGGCGGCAGCCGGGGCTGCGGCCGGGGCAGCAGGAGCGGCTTCAGCGGCGGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGgcgc                                                                                                                                            <  2:120676/146‑1 (MQ=255)                                                                                                                                                                                      aaCCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGgcagca                                                                                                                                                                           >  1:285897/1‑116 (MQ=255)                                                                                                                                                                                      aaCCGATGTCCGGCACGTGGATGTCCTGCACGCCGGCAGCAGCCGGGGCTGCGgccagcgtgcaggacctccacgtgccggacatcggttcgtcgggcaaggccaagatca                                                                                                                                                                                >  1:468797‑M2/1‑53 (MQ=255)                                                                                                                                                                                            tGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGgccagcgtgcaggacatccacgtgccggacatcggttcgtcgg                                                                                                                                                                                               >  2:762699‑M2/1‑47 (MQ=255)                                                                                                                                                                                              gccGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTtcgt                                                                                                                 <  2:36136/165‑1 (MQ=255)                                                                                                                                                                                                               cTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTg                           <  1:945026/235‑1 (MQ=255)                                                                                                                                                                                                                   gctccggCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGTATTTCCATGGAGGCCTTGTCgg                       >  1:549199/6‑235 (MQ=255)                                                                                                                                                                                                                     gCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCg                                               >  1:976150/1‑209 (MQ=255)                                                                                                                                                                                                                       tGGCAGCAGCCTGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAgg                                <  1:63517/222‑1 (MQ=255)                                                                                                                                                                                                                         gcagcaGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCAt                                     <  2:987468/215‑1 (MQ=255)                                                                                                                                                                                                                              agcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGGGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGc                                                                                       <  2:898300/160‑1 (MQ=255)                                                                                                                                                                                                                               gcCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGa                                                                    >  2:951520/1‑178 (MQ=255)                                                                                                                                                                                                                                   gggCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTcagca        <  2:841653/234‑1 (MQ=255)                                                                                                                                                                                                                                      cTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAgg      >  2:1002053/1‑233 (MQ=255)                                                                                                                                                                                                                                        gCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGctct  <  1:656536/235‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                         ATCAGGTCGCCAGTGCCGACTTCGTCTTCCAGCTTGCACAGCACTTCTTCGACCACGCCGGCAGCCGGCGACGGGATTTCCATGGAGGCCTTGTCGGACTCCAGGGTAATCAGCGACTGGTCGGCTTCGACGGTGTCGCCGACTTTGACCAGCACTTCGATGATCTTGGCCTTGCCCGACGAACCGATGTCCGGCACGTGGATGTCCTGCACGCTGGCAGCAGCCGGGGCTGCGGCCGGAGCAGCAGGAGCGGCTTCAGCGGCTGGCGCTGGCGCCGCAGCCGGAGCAGCGGCAGCAGCCGGCGCCTCAGGGGCCGCAGCAGCGGCGCCCTCGGCTTCCAGGACCAGCAGTTCGTCGCCTTCTTTCAGGCGGTCGCCCAGCTTGACCTTCAGTTCCTTGATCACGCCAGCCTTGGGCGCCGGAATTTCCATGGAGGCCTTGTCGGACTCCAGGGTCAGCAGGCTCT  >  AE015451/407445‑407910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.