New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	503644 =	47 (0.820)	4 (0.070)	4/324	NT	9.8%	coding (675/828 nt)	PP_0414	Polyamine ABC transporter, permease protein
	?	AE015451	503701 =	29 (0.530)					coding (732/828 nt)	PP_0414	Polyamine ABC transporter, permease protein

GCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/503774‑503644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcggcGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGA  >  AE015451/503701‑503928                                                                                                                                                                                                                                                                                                                                                                         GCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGTAGCAACAACACCGAGACCGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGG                                                                                                                                                                          <  1:847615/191‑1  CTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCG                                                                                                                                                                                                                                        >  2:1018541/1‑128     CTCGCTACGCCCACGCAACCCCTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCGCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGC                                                                                                                                                                                                <  2:614103/165‑1        GCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTA                                                                                                                                                                     <  2:614572/189‑1                        CACTCCAGGTTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGC                                                                                                                                                                   <  1:421534/175‑1                                                                                                                             CCGCGGCGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGA  >  1:823794/1‑235                                                                                                                                                                                                                                                                                                                                                                         GCTTCTCGCTACGCCCACGCAACCACTCCAGGGTCAGCAGCAACAACACCGAGAACGCAATCAGCAAGGTCGCCGCCGCGGCAATGGTCGGGCTCAGGTTCTCGCGAATACCGCTGAACATCTGCCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/503774‑503644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgccgcggcGGCGACCTTGCTGATTGCGTTCTCGGTGTTGTTGCTGCTGACCCTGGAGTGGTTGCGTGGGCGTAGCGAGAAGCTGAGGACTCAACAGCCGGCTTGATGATGGCTTGCCTGTACCGGCCTCTTCGCGGCTAAAGCCGGAAGAGGCCGGCACAGGTTGCGTTGGTCGACACCAATTGATACCAATCAGCCTTCATCGCTTTCCCTGAGTTACAATGCGCGCCACCGTGA  >  AE015451/503701‑503928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.