| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 873680 | 61 (1.060) | 6 (0.110) | 5/324 | NT | 10.6% | coding (38/621 nt) | PP_0758 | conserved protein of unknown function |
| ? | AE015451 | = 873734 | 43 (0.790) | coding (92/621 nt) | PP_0758 | conserved protein of unknown function | |||||
GGCCGTGACCTTGTCGGTGCCGCCGGCGAGCTGCCCTTGCAGGGCCTGCTGGGGCTCGTCGTGGCTGATGAGCAGGCCGAATGCGCACGGCAGCTGATCGATGCGTACAATGATGCCCAGCCACTGGTTGGCGACGAACCGGAGAATGTCCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGCCCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/873457‑873680‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccaggcGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAACGTCCACACATGGGCGAATTCAGAACCTAGCAGATCAAGGTACCGGGGACATTCTCCGGTTCGTCGCCAACCAGTGGCTGGGCATCATTGTACGCATCGATCAGCTGCCGTGCGCATTCGGCCTGCTCATCAGCCACGAC < AE015451/873734‑873514 GGCCGTGACCTTGTCGGTGCCGCCGGCGAGCTGCCCTTGCAGGGCCTGCTGGGGCTCGTCGTGGCTGATGAGCAGGCCGAATGCGCACGGCAGCTGATCGATGCGTACAATGATGCCCAGCCACTGGTTGGCGACGAACCGGAGAATGTCCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGCCC > 1:831545/1‑219GGCCGTGACCTTGTCGGTGCCGCCGGCGAGCTGCCCTTGCAGGGCCTGCTGGGGCTCGTCGTGGCTGATGAGCAGGCCGAATGCGCACGGCAGCTGATCGATGCGTACAATGATGCCCAGCCACTGGTTGGCGACGAACCGGAGAATGTCCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGACCCCAG > 1:356655/1‑222 CTTGCAGGGCCTGCTGGGGCTCGTCGTGGCTGATGAGCAGGCCGAATGCGCACGGCAGCTGATCGATGCGTACAATGATGCCCAGCCACTGGTTGGCGACGAACCGGAGAATGTCCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGC < 1:59449/182‑1 ACGAACCGGAGAATGTCCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCACGGGCCTGGGGCCA > 2:849289/1‑156 CCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGCCGACGCGAAAGCCCGGCAGACTGGCACGGGCCTGGGGC > 1:1037665/1‑138 CCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAACGTCCACAC > 1:1009044/1‑157 CATGTGTGGACGTTATGCCCTGTTTCGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGC > 2:854961/1‑64 CCCTGTTTCGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAACGTCCACACATGGGCGAATTCAGAACCTAGCAGATCAAGGTACCGGGGACATTCTCCGGTTCGTCGCCAACCAGTGGCTGGGCATCATTGTACGCATCGAT > 2:981994/1‑204 CCCTGTTTCGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGCCG > 2:831542/1‑49 CGCTGGCCCCAGGCGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAACGTCCACACATGGGCGAATTCAGAACCTAGCAGATCAAGGTACCGGGGACATTCTCCGGTTCGTCGCCAACCAGTGGCTGGGCATCATTGTACGCATCGATCAGCTGCCGTGCGCATTCGGCCTGCTCATCAGCCACGAC > 1:702921/1‑235 CCCCAGGCGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAACGTCCACACATGGGCGAATTCAGAACC < 1:69446/116‑1 AGGCGATAGATTCCATTGGGCCGGCTGGCCGACGGGAGAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAAAGTCCACACATGGGCGAATTCAGAACCTAGCAGATCAAGGTACCGGGG > 2:141606/1‑133 GGCCGTGACCTTGTCGGTGCCGCCGGCGAGCTGCCCTTGCAGGGCCTGCTGGGGCTCGTCGTGGCTGATGAGCAGGCCGAATGCGCACGGCAGCTGATCGATGCGTACAATGATGCCCAGCCACTGGTTGGCGACGAACCGGAGAATGTCCCCGGTACCTTGATCTGCTAGGTTCTGAATTCGCCCATGTGTGGACGTTATGCCCTGTTTCGCTGGCCCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/873457‑873680‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccaggcGATATATTCCATTGGGCCGGCTGGCCGACGGGAAAGCCCGGCAGACTGGCAAGGGCCTGGGGCCAGCGAAACAGGGCATAACGTCCACACATGGGCGAATTCAGAACCTAGCAGATCAAGGTACCGGGGACATTCTCCGGTTCGTCGCCAACCAGTGGCTGGGCATCATTGTACGCATCGATCAGCTGCCGTGCGCATTCGGCCTGCTCATCAGCCACGAC < AE015451/873734‑873514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |