New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 938794	52 (0.900)	3 (0.050)	3/332	NT	6.2%	coding (6828/18933 nt)	PP_0806	putative Surface adhesion protein
	?	AE015451	= 939185	41 (0.730)					coding (6437/18933 nt)	PP_0806	putative Surface adhesion protein

GGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/938557‑938794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgATGGCCTGGTGCTCAGTGGCCGTGGCGAGGCCGGTGCTACCGTACAGGTACGTGATGCCAACGGCTCTGTCATAGGCACCGCCACAGTCGGCGCCAACGGAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCG  <  AE015451/939185‑939045                                                                                                                                                                                                                                                                                                                                                                                             GGTGATGCTGAAACTGCCAGTGGCGTCGACCCCCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCG                                                                                                                                                  <  1:156991/235‑1                                          CCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCGTCGATGGCCACCACGTCCAGCAGTTCGCC                                                                                                                                                >  1:798315/1‑196                                                  GTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCGCTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACATCCAGCAGTTCGCCGATGGCCTGGTGCTCAGTGGCCGTGGCGAGGCCGG                                                                                                             <  1:691318/223‑1                                                                                                                                                                           CAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCCCGTCCAGCAGTTCGCCGATGGCCTGGTGCTCAGTGGCCGTGGCGAGGC                                                                                                                >  2:227668/1‑99                                                                                                                                                                           CAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCGATGGCCTGGTGCTCAGTGGCCGTGGCGAGGC                                                                                                                <  1:227670/99‑1                                                                                                                                                                                                                                             CGATGGCCTGGTGCTCAGTGGCCGTGGCGAGGCCGGTGCTACCGTACAGGTACGTGATGCCAACGGCTCTGTCATAGGCACCGCCACAGTCGGCGCCAACGGAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCG  >  1:572472/1‑143                                                                                                                                                                                                                                                                                                                                                                                             GGTGATGCTGAAACTGCCAGTGGCGTCGACCACCACACTACCCAGCACGGTGGTGCCATCGGCGGCCAGCACACGCACGGTGCTGCCCACTTCGGCGCGGCCGGTGACCTCGCTGCCGTTGGCACTGATCGCTAGCTCGCTCGGGGTGACCGGCGGGGTGATGTCTGGCGCAGCGATTTGCACCGGCAGGGACGAAGCGCCGGTGCCATCGATGGCCACCACGTCCAGCAGTTCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/938557‑938794 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgATGGCCTGGTGCTCAGTGGCCGTGGCGAGGCCGGTGCTACCGTACAGGTACGTGATGCCAACGGCTCTGTCATAGGCACCGCCACAGTCGGCGCCAACGGAACCTTCTTGGTCGACCTCACCCCAGCCGCGCAACCGGGCG  <  AE015451/939185‑939045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.