| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 1516336 | 81 (1.410) | 5 (0.090) | 4/322 | NT | 6.7% | coding (1271/1749 nt) | ftsI | peptidoglycan DD transpeptidase |
| ? | AE015451 | = 1516459 | 64 (1.180) | coding (1394/1749 nt) | ftsI | peptidoglycan DD transpeptidase | |||||
GCATGAGCAAGATCGCCTTCGACATCGGCGGCGAGGCCATCTACCGGGTCATGTCCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1516120‑1516336‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcggcgctTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACTTCCTTCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTGGCCAGCGCCGCGTAGGCATGCACCAGCTGCAGGGCGGTCACCGATACGCCGTAGCCATAGGACAGGGTGGCGGTCTCGGCCTTGCGCCACTCACGATGGTTGGGCAGGT < AE015451/1516459‑1516231 GCATGAGCAAGATCGCCTTCGACATCGGCGGCGAGGCCATCTACCGGGTCATGTCCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCG > 1:966430/1‑212GCATGAGCAAGATCGCCTTCGACATCGGCGGCGAGGCCATCTACCGGGTCATGTCCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCG < 2:966427/212‑1 AGATCGCCTTCGACATCGGCGGCGAGGCCATCTACCGGGTCATGTCCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCCGGTGCCTGCCTCCGCGG > 2:310449/1‑204 GGCGGCGAGGCCCTCTACCGGGTCATGTCCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCG < 2:256644/186‑1 CCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTAGTGCATGCCTACGCCGCG > 2:70455/1‑161 CTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTAC > 1:1075571/1‑43 CTACGGCGTATCGGAGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTTCGATCACCTGCTCCAGCAAGCCCTGAACGG > 2:401867/1‑82 GCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACTTCCTTCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTGGCCAGCGCCGCGTAGGCATGCACCAGCTGCAGGGCGGGCACC > 1:119040/1‑208 GCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTTCGATCACCTGCTGCAGCATGCCCGGAACGGTTTCGGCAACTTCCTGCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTG > 1:1059560/1‑166 TGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACCTCCTTCGGAATGGCCGGCACGGCTTCCG > 2:5914/1‑107 GCCCTGCAGCTGGTGCATGCCTACGCGGCGCTTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACTTCCTTCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTGGCCAGCGCCGC > 2:992134/1‑163 CGCGGCGCTTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACTTCCTTCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTGGCCAGCGCCGCGTAGGCATGCACCAGCTGCAGGGC < 2:1080008/164‑1 CGGCGCTTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACTTCCTTCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTGGCCAGCGCCGCGTAGGCATGCACCAGCTGCAGGGCGGTCACCGATACGCCGTAGCCATAGGACAGGGTGGCGGTCTCGGCCTTGCGCCACTCACGATGGTTGGGCAGGT > 1:606702/1‑236 GCATGAGCAAGATCGCCTTCGACATCGGCGGCGAGGCCATCTACCGGGTCATGTCCCAGGTCGGCCTGGGCCAGTACACCGGCCTTGGCTTCCCGGGCGAACGTGTCGGCAACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1516120‑1516336‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcggcgctTCGATCACCTGCTGCAGCATGCCCTGAACGGTTTCGGCAACTTCCTTCGGAATGGCCTGCACGGCTTCCGGCGTCTTGTCGACCTTGATGATCGACAGCGGCACCATCTTGCCGTCGTTGGCCAGCGCCGCGTAGGCATGCACCAGCTGCAGGGCGGTCACCGATACGCCGTAGCCATAGGACAGGGTGGCGGTCTCGGCCTTGCGCCACTCACGATGGTTGGGCAGGT < AE015451/1516459‑1516231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |