New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1516336	81 (1.410)	5 (0.090)	4/322	NT	6.7%	coding (1271/1749 nt)	ftsI	peptidoglycan DD transpeptidase
	?	AE015451	= 1516459	64 (1.180)					coding (1394/1749 nt)	ftsI	peptidoglycan DD transpeptidase

ACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGGCGCCCGTATTCAGCAA  >  AE015451/1516231‑1516693                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           aCCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAagcgccg                                                                                                                                                                                                                                     >  1:606702‑M2/1‑229 (MQ=255)            cATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCtt                                                                                                                                                                                                                          <  1:953101/236‑1 (MQ=255)                 tGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGa                                                                                                                                                                                                                      <  1:608809/235‑1 (MQ=255)                      ggCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTACAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAg                                                                                                                                                                                                                <  1:137636/236‑1 (MQ=255)                       gcgcAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAg                                                                                                                                                                                                                <  1:640491/235‑1 (MQ=255)                       gcgcAAGGCCGAGACCGCCACCCGGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAg                                                                                                                                                                                                                <  1:322989/235‑1 (MQ=255)                        cgcAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGt                                                                                                                                                                                                              >  1:415509/1‑236 (MQ=255)                        cgcAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGt                                                                                                                                                                                                              >  1:1036648/1‑236 (MQ=255)                               ccGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAgtggcc                                                                                                                                                                                                           >  2:785844/1‑227 (MQ=255)                                     ccGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATc                                                                                                                                                                                                   >  2:594001/1‑234 (MQ=255)                                     ccGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCAc                                                                                                                                                                                                 >  1:400584/1‑236 (MQ=255)                                             cTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGcc                                                                                                                                                                                           <  2:437182/234‑1 (MQ=255)                                                   tATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCg                                                                                                                                                                                          >  1:526842/1‑229 (MQ=255)                                                        cTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCa                                                                                                                                                                                                  >  1:860947/1‑216 (MQ=255)                                                        cTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCa                                                                                                                                                                              >  1:261162/1‑236 (MQ=255)                                                         gaCGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGcc                                                                                                                                                                                           <  2:594074/221‑1 (MQ=255)                                                             gCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCAc                                                                                                                                                                             >  2:512949/1‑232 (MQ=255)                                                             gCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACcgc                                                                                                                                                                          >  1:458485/1‑235 (MQ=255)                                                             gCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACcg                                                                                                                                                                           >  2:463178/1‑234 (MQ=255)                                                                    ggTGCCCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAagcgccgcgtaggcatgcaccagctgcagggcggtcaccgatacgc                                                                                                                                                                                              >  1:119040‑M2/1‑162 (MQ=255)                                                                    ggTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGcc                                                                                                                                                                                           <  1:487559/211‑1 (MQ=255)                                                                    ggTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAg                                                                                                                                                                   >  1:1033287/1‑235 (MQ=255)                                                                           gCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAagcgccgcg                                                                                                                                                                                                                                   <  2:1080008‑M2/164‑10 (MQ=255)                                                                           gCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGt                                                                                                                                                           >  1:675742/1‑236 (MQ=255)                                                                             ccTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGCTCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGt                                                                                                                                                                                    >  1:179466/1‑209 (MQ=255)                                                                                         gCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAggg                                                                                                                                               >  2:1019479/1‑234 (MQ=255)                                                                                          cATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGAt                                                                                                                                             >  1:471603/1‑235 (MQ=255)                                                                                                tACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGa                                                                                                                                              >  1:849635/1‑228 (MQ=255)                                                                                                  cgcgGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCa                                                                                                                                                                              <  1:106117/194‑1 (MQ=255)                                                                                                  cgcgGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACcgcgc                                                                                                                                                                        <  2:612012/200‑1 (MQ=255)                                                                                                   gcggcgCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAagcgccgcgtaggcatgcaccagctgcagggc                                                                                                                                                                                                            >  2:992134‑M2/1‑131 (MQ=255)                                                                                                     ggcgCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCCGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGCGCCAAGGGATACACCGAAAACg                                                                                                                                 >  1:206326/1‑236 (MQ=255)                                                                                                     ggcgCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACAGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACAGCGaca                                                                                                                                    >  1:34766/1‑231 (MQ=255)                                                                                                          tGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGGTcga                                                                                                                                                                                                     >  1:991727/1‑161 (MQ=255)                                                                                                           ggCCAACGACGGCAAGATTGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAgg                                                                                                                                                                                                               <  2:232409/152‑1 (MQ=255)                                                                                                            gCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCAcctgg                                                                                                                                                                         <  1:727606/189‑4 (MQ=255)                                                                                                              cAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGCAGGAAGTTGCCGAAACCGTTCCGGGCATGCTGCAGCAGGTGATCGAagcgccgcgtaggcatgcaccagctgcagggcggtcaccgatacgc                                                                                                                                                                                              >  1:1059560‑M2/1‑120 (MQ=255)                                                                                                               aaCGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACcgc                                                                                                                         >  2:743602/1‑234 (MQ=255)                                                                                                                      gCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACg                                                                                                                                                                                                <  2:932966/156‑1 (MQ=255)                                                                                                                      acAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCACGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTCTTc                                                                                                                <  2:558465/235‑1 (MQ=255)                                                                                                                         aGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGcc                                                                                                             >  1:334212/1‑236 (MQ=255)                                                                                                                                   gCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCgg                                                                                                     <  2:1036645/234‑1 (MQ=255)                                                                                                                                       tCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCAcc                                                                                                                                                             <  2:860944/174‑1 (MQ=255)                                                                                                                                            catcaAGGTCGACACGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGCTGCCGAAACCGTTCAGGGCATGCTGCGGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAg                                                                                                                                                                   <  2:259681/163‑1 (MQ=255)                                                                                                                                            catcaAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTc                                                                                                                <  2:810768/214‑1 (MQ=255)                                                                                                                                             atcaAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACg                                                                                                                                 <  2:436095/196‑1 (MQ=255)                                                                                                                                                 aGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGAcc                                                                                       >  2:1041330/1‑234 (MQ=255)                                                                                                                                                    tCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCtt                                                                                                        >  1:1014553/1‑214 (MQ=255)                                                                                                                                                    tCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCcgcg                                                                                   >  1:718477/1‑235 (MQ=255)                                                                                                                                                                cGGAAGCCGTGCCGGCCATTCCGAAGGAGGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAagcgccgcgtaggcatgcaccagctgcagggcggtca                                                                                                                                                                                                       >  2:5914‑M2/1‑70 (MQ=255)                                                                                                                                                                          gCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCATGGCATGCTGCAGCAGTTGAGCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGcc                                                                                                                                                                                           <  2:182459/109‑1 (MQ=255)                                                                                                                                                                           cAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCAc                                                                                                                                                              <  2:235356/137‑1 (MQ=255)                                                                                                                                                                             ggCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAggg                                                                                                                                               <  2:701817/150‑1 (MQ=255)                                                                                                                                                                             ggCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCAGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAg                                                                                                                                                 <  2:10225/148‑1 (MQ=255)                                                                                                                                                                               ccATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATcgac                                                          <  2:1033284/233‑1 (MQ=255)                                                                                                                                                                                      gaaggaagTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGaa                                                <  1:587309/236‑1 (MQ=255)                                                                                                                                                                                           aagTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAga                                                      >  1:638630/1‑224 (MQ=255)                                                                                                                                                                                           aagTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGggt                                           <  1:463181/236‑1 (MQ=255)                                                                                                                                                                                             gTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGggt                                           >  2:366251/1‑234 (MQ=255)                                                                                                                                                                                                  cGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACt                                    <  1:90755/236‑1 (MQ=255)                                                                                                                                                                                                       ccGTTCAGGGCTTGCTGGAGCAGGTGATCGAagcgccgcgtaggcatgcaccagctgcagggcggtctccgatacgccgtag                                                                                                                                                                                         >  2:401867‑M2/1‑31 (MQ=255)                                                                                                                                                                                                        cGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATcgtcgt                                                                    >  1:306953/1‑198 (MQ=255)                                                                                                                                                                                                         gTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGt                                                                                                                                                                                                         <  2:130559/64‑1 (MQ=255)                                                                                                                                                                                                         gTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGt                                                                                                                                                                                                         >  1:130561/1‑64 (MQ=255)                                                                                                                                                                                                         gTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCt                                                                                                         <  2:6852/160‑1 (MQ=255)                                                                                                                                                                                                                     ctgcAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGcc                                                                                                                                                                                           <  2:133373/66‑1 (MQ=255)                                                                                                                                                                                                                     ctgcAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGcc                                                                                                                                                                                           >  1:133375/1‑66 (MQ=255)                                                                                                                                                                                                                     ctgcAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGtt                                                                                                                 <  1:229813/140‑1 (MQ=255)                                                                                                                                                                                                                       gcagcaGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGgcgc               >  1:427016/1‑236 (MQ=255)                                                                                                                                                                                                                       gcagcaGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGACCTGGTTTCGgcg                <  1:660182/235‑1 (MQ=255)                                                                                                                                                                                                                               tGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGGCGCCCGTATTc       <  1:366254/236‑1 (MQ=255)                                                                                                                                                                                                                                   ggAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCAGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGgcg                <  1:540966/222‑1 (MQ=255)                                                                                                                                                                                                                                   cGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGGCGCCCGTATTCAGCa   >  1:265459/1‑236 (MQ=255)                                                                                                                                                                                                                                    gAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCGACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACg                                                                              >  2:827622/1‑160 (MQ=255)                                                                                                                                                                                                                                     aaGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAggg                                                                                                                                               >  2:373879/1‑94 (MQ=255)                                                                                                                                                                                                                                     aaGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAggg                                                                                                                                               <  1:373882/94‑1 (MQ=255)                                                                                                                                                                                                                                     aaGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGGCGCCCGTATTCAGCaa  >  1:850846/1‑235 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                           ACCTGCCCAACCATCGTGAGTGGCGCAAGGCCGAGACCGCCACCCTGTCCTATGGCTACGGCGTATCGGTGACCGCCCTGCAGCTGGTGCATGCCTACGCGGCGCTGGCCAACGACGGCAAGATGGTGCCGCTGTCGATCATCAAGGTCGACAAGACGCCGGAAGCCGTGCAGGCCATTCCGAAGGAAGTTGCCGAAACCGTTCAGGGCATGCTGCAGCAGGTGATCGAAGCGCCGCGTGGCGTCTTCCGAGCCCAGGTGCCGTTCTATCACGTGGCCGGCAAGTCCGGCACCGCGCGTAAGGCCACCGTGGGTGCCAAGGGATACACCGAAAACGCCTACCGCTCGCTGTTCGCCGGCTTCGGGCCTATGAGCGACCCGCGCTACGCCATCGTCGTGGTCATCGACGAGCCAAGAAAGGGTGGTTACTTCGGTGGCCTGGTTTCGGCGCCCGTATTCAGCAA  >  AE015451/1516231‑1516693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.