New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2087730 = | 26 (0.450) | 4 (0.070) | 4/328 | NT | 9.9% | intergenic (+543/+375) | PP_1865/aroH | transposase/Phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
? | AE015451 | 2256224 = | 48 (0.870) | intergenic (+284/‑420) | asd/PP_1990 | Aspartate‑semialdehyde dehydrogenase/transposase |
TTTGGGCTTTTGGGTTGTGCGCTTTCGCATCAAGTAGACATTCATTCACGATGTAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGCCAAAGTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2087937‑2087730 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccccaGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAG > AE015451/2256224‑2256452 TTTGGGCTTTTGGGTTGTGCGCTTTCGCATCAAGTAGACATTCATTCACGATGTAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGCCAAAGTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAG < 1:658757/202‑1 GCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCAGGAT < 2:406872/88‑1 CTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGC < 2:188169/62‑1 CTCCGGGGGCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCG > 1:99398/1‑96 TCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCAGGATGGGGCCTG < 1:308207/67‑1 GGTCCCCTCACTCCGGCCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCG > 2:480489/1‑106 TCCCGGGAGGACCGCGCTGCAGGCCCCAGGATGCGGCCTTCAG > 2:1041397/1‑43 GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAG > 1:60334/1‑236 GGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTC > 1:609735/1‑190 TTTGGGCTTTTGGGTTGTGCGCTTTCGCATCAAGTAGACATTCATTCACGATGTAGGCGCCTATTCACCTTTCCGCCCTTCCGGCGGGTTACTTTGGTCGTGGCCAAAGTAACCAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTACGCTCCGGGGTCCCCTCACTCCGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2087937‑2087730 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccccaGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAGGGGACCCCGGAGCGTAGCGCAGGGGCCGGATGATGGGAGCCGACGGTTTTTGGTTCCTTTTTGCCACGACAAAAAGGGACCCGCCGTAAGGGCGGAAAGGTGACTATGCGCCACCTGCGTGAATGAATACCTACTCGGTGTGAATGCCCACATCCAAGAAGCAAGAAGCAAGAAGCAAGAAG > AE015451/2256224‑2256452 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |