New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2283311	39 (0.680)	3 (0.050)	3/324	NT	8.1%	coding (504/978 nt)	PP_2011	conserved exported protein of unknown function
	?	AE015451	= 2283449	31 (0.570)					coding (366/978 nt)	PP_2011	conserved exported protein of unknown function

CCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGCGGGTTGGCGCCCTCCGGCGCCTCGGCATGCCCAGGCCGTGGATAGAACAGGTAACCACCCAGCCACATTTGCGCCTGCACCTGCTCCACCCCTAGCTGCGCCAGCGCCTGACGGCTGTGCGCTCCCGTGGACATGGGCAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGCAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2283082‑2283311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacctggcGATTCGCGACGGCGGGCACACCCTGGGCGAGCTCGACGTGGTGCTGCGCGACCGCGACGGCGTGCACCACCTGGAACTGGCGATCAAGCTGTACCTGGGCCCGGAAGACGCCGGGCACGATCCCCATGCCTGGCTGGGGCCAGGTTGCCATGACCGGCTGGGGACCAAGCTTGCGCACCTGGCGGGGCACCAGTTGCCCATGTCCACGGGAGCGCACAGCCGTCAGGCGCTGGCG  <  AE015451/2283449‑2283215                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGCGGGTTGGCGCCCTCCGGCGCCTCGGCATGCCCAGGCCGTGGATAGAACAGGTAACCACCCAGCCACATTTGCGCCTGCACCTGCTCCACCCCTAGCTGCGCCAGCGCCTGACGGCTGTGCGCTCCCGTGGACATGGGCAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGCAAC                                                                                                                                                                                                                                                  >  2:506312/1‑225        ACGAAGCCAGCGCCCCCGCAAATGTTGCGGGTTGGCGCCCTCCGGCGCCTCGGCATGCCCAGGCCGTGGATAGAACAGGTAACCACCCAGCCACATTTGCGCCTGCACCTGCTCCACCCCTAGCTGCGCCAGCGCCTGACGGCTGTGCGCTCCCGTGGACATGGGCAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGC                                                                                                                                                                                                                                                     >  2:970450/1‑215                                                               TGCCCAGGCCGTGGATAGAACAGGTAACCACCCAGCCACATTTGCGCCTGCACCTGCTCCACCCCTAGCTGCGCCAGCGCCTGACGGCTGTGCGCTCCCGTGGACATGGGCAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGCAACCTGGCGATTCGCGACGGCGGGCACACCCTGGGCGAGCTCGACGTGGTGCTGCGCGACCGCGACGGCGTGCACC                                                                                                                                                                         <  1:560733/236‑1                                                                                                                                                                             CAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGCAACCTGGCGATTCGCGACGGCGGGCACACCCTGGGCGAGCTCGACGTGGTGCTGCGCGACCGCGACGGC                                                                                                                                                                                >  1:611433/1‑119                                                                                                                                                                             CAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGCAACCTGGCGATTCGCGACGGCGGGCACACCCTGGGCGAGCTCGACGTGGTGCTGCGCGACCGCGACGGC                                                                                                                                                                                <  2:611430/119‑1                                                                                                                                                                                                                                      CGATTCGCGACGGCGGGCACACCCTGGGCGAGCTCGACGTGGTGCTGCGCGACCGCGACGGCGTGCACCACCTGGAACTGGCGATCAAGCTGTACCTGGGCCCGGAAGACGCCGGGCACGATCCCCATGCCTGGCTGGGGCCAGGTTGCCATGACCGGCTGGGGACCAAGCTTGCGCACCTGGCGGGGCACCAGTTGCCCATGTCCACGGGAGCGCACAGCCGTCAGGCGCTGGCG  >  1:34480/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCGCCGACGAAGCCAGCGCCCCCGCAAATGTTGCGGGTTGGCGCCCTCCGGCGCCTCGGCATGCCCAGGCCGTGGATAGAACAGGTAACCACCCAGCCACATTTGCGCCTGCACCTGCTCCACCCCTAGCTGCGCCAGCGCCTGACGGCTGTGCGCTCCCGTGGACATGGGCAACTGGTGCCCCGCCAGGTGCGCAAGCTTGGTCCCCAGCCGGTCATGGCAACCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2283082‑2283311 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacctggcGATTCGCGACGGCGGGCACACCCTGGGCGAGCTCGACGTGGTGCTGCGCGACCGCGACGGCGTGCACCACCTGGAACTGGCGATCAAGCTGTACCTGGGCCCGGAAGACGCCGGGCACGATCCCCATGCCTGGCTGGGGCCAGGTTGCCATGACCGGCTGGGGACCAAGCTTGCGCACCTGGCGGGGCACCAGTTGCCCATGTCCACGGGAGCGCACAGCCGTCAGGCGCTGGCG  <  AE015451/2283449‑2283215

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.