New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2343559 = | 37 (0.640) | 3 (0.060) | 3/320 | NT | 6.8% | coding (145/249 nt) | PP_2059 | UPF0337 protein PP_2059 |
? | AE015451 | 2343648 = | 47 (0.870) | coding (56/249 nt) | PP_2059 | UPF0337 protein PP_2059 |
TGACAAACAGTCGCTTTGAACCATTGCGACGAATCACCGCCCTAACCCTGTGCTGTTAACCCAAAGCCGCTCACAGGAAGGAACTAAGCCATCATGAAACGCGAACAGATCGAAGGTGTAGCAGAAGACCTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2343796‑2343559 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctacggcgCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATGGCTTAGTTCCTTCCTGTGAGCGGCTTTGGGTTAACAGCACAGGGTTAGGGCGGTGATTCGTCGCAATGGTTCAAAGCGACTGTTTGTCACCTGCAGGTCATGCGCGCCGGCATAGATTCGCATCTGACATGAGCGTGCTAGGTTAGCGTGCCTTCTTTTCGAGGAT > AE015451/2343648‑2343873 TGACAAACAGTCGCTTTGAACCATTGCGACGAATCACCGCCCTAACCCTGTGCTGTTAACCCAAAGCCGCTCACAGGAAGGAACTAAGCCATCATGAAACGCGAACAGATCGAAGGTGTAGCAGAAGACCTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGG < 1:249803/236‑1 TGTTAACCCAAAGCCGCTCACAGGAAGGAACTAAGCCATCATGAAACGCGAACAGATCGAAGGTGTAGCAGAAGACCTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGG > 1:85660/1‑183 AAGGAACTAAGCCATCATGAAACGCGAACAGATCGAAGGTGTAGCAGAAGACCTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGG < 2:831001/159‑1 ACAGATCGAAGGTGTAGCAGAAGACCTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCTTCAGGCCGCAGGCCAGGTGACCAAGTCCTTCGGCGCTTTGCGCCTTGCCAGCCATGTCTTCTGCTACACCTTC < 2:833142/172‑1 CTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGGCGCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATGGCTTAGTTCCTTCCTGTGAGCGGCTTTGGGTTAACA < 2:557182/205‑1 CTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACG < 1:501208/106‑1 CTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACG > 2:501205/1‑106 CTGGCTGGCAAGGAGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGAGCAAGACCTACGGC > 2:1013044/1‑108 CGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGGCGCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATG < 1:427047/139‑1 ACCTACGGCGCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATGGCTTAGTTCCTTCCTGTGAGCGGCTTTGGGTTAACAGCACAGGGTTAGGGCGGTGATTCGTCGCAATGGTTCAAAGCGACTGTTTGTCACCTGCAGGTCATGCGCGCCGGCATAGATTCGCATCTGACATGAGCGTGCTAGGTTAGCGTGCCTTCTTTTCGAGGAT < 1:193043/236‑1 ACCTACGGCGCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATGGCTTAGTTCCTTCCTGTGAGCGGCTTTGGGTTAACAGCACAGGGTTAGGGCGGTGATTCGTCGCAATGGTTCAAAGCGACTGTTTGTCACCTGCAGGTCATGCGCGCCGGCATAGATTCGCATCTGACATGAGCGTGCTAGGTTAGCGTGCCTTCTTTTCGAGGAT < 1:215128/236‑1 gGCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATGGCTTAGTTCCTTCCTGTGAGCGGCTTTGGGTTAACAGCACAGGGTTAGGGCGGTGATTCGTCGCAATGGTTCAAAGCGACTGTTTGTCACCTGCAGGTCATGCGCGCCGGCATAGATTCGCATCTGACATGAGCGTGCTAGGTTAGCGT < 1:893208/210‑1 TGACAAACAGTCGCTTTGAACCATTGCGACGAATCACCGCCCTAACCCTGTGCTGTTAACCCAAAGCCGCTCACAGGAAGGAACTAAGCCATCATGAAACGCGAACAGATCGAAGGTGTAGCAGAAGACCTGGCTGGCAAGGCGCAAAGCGCCGTAGGTCGCCTGGTCGAAGACCCGGCGCTGGAAGCCGAAGGCGATGCGCGTCAGGCCGCAGGCCAGGTGACCAAGACCTACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2343796‑2343559 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacctacggcgCTTTGCGCCTTGCCAGCCAGGTCTTCTGCTACACCTTCGATCTGTTCGCGTTTCATGATGGCTTAGTTCCTTCCTGTGAGCGGCTTTGGGTTAACAGCACAGGGTTAGGGCGGTGATTCGTCGCAATGGTTCAAAGCGACTGTTTGTCACCTGCAGGTCATGCGCGCCGGCATAGATTCGCATCTGACATGAGCGTGCTAGGTTAGCGTGCCTTCTTTTCGAGGAT > AE015451/2343648‑2343873 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |