New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2363456 | 42 (0.730) | 3 (0.050) | 3/332 | NT | 6.9% | coding (421/2724 nt) | PP_2076 | conserved protein of unknown function |
? | AE015451 | = 2363464 | 40 (0.710) | coding (413/2724 nt) | PP_2076 | conserved protein of unknown function |
AGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2363290‑2363456 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggAGCCTGCCCCCAGCGCCGGCAATCTGGATGAGATCCTTCGCGGTTTCGGCTGGACCATCACCCTCTACGACCTGGATGACATCCAGGAGCTGCGTCCATTGTTCAGCCCTTCCCCGCTGACCCCGCGCATGCTCGACAACTACCGCCTGCTCGACGACGAATACCGCAGCAGCCTGCCCACAATCGATATCGCCCGCTTCATCCAGCCTTCCGACGCCCCGC < AE015451/2363464‑2363243 AGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGG > 1:625033/1‑166 AGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGG < 2:625030/166‑1 TGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGAGCCTGCCCCCAGCGCCGGCAATCTGGATGAGATCCTTCGCGGTTTCGGCTGGACCATCACCCTCTACGACCTGGATGACATCCAGGAGCTGCGTCCATTGTTCAGCCCTTCCCCGCTGACCCCGCGCATGCT < 1:138714/185‑1 GAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGAGCCTGCCCCCAGCGCCGGCAATCTGGATGAGATCCTTCGCGGTTTCGGCTGGACCATCACCCTCTACGACCTGGATGACATCCAGGAGCTGCGTCCcg > 2:138712/1‑136 GCCGGCGCTGGGAGCCTGCCCCCAGCGCCGGCAATCTGGATGAGATCCTTCGCGGTTTCGGCTGGACCATCACCCTCTACGACCTGGATGACATCCAGGAGCTGCGTCCATTGTTCAGCCCTTCCCCGCTGACCCCGCGCATGCTCGACAACTACCGCCTGCTCGACGACGAATACCGCAGCAGCCTGCCCACAATCGATATCGCCCGCTTCATCCAGCCTTCCGACGCCCCGC > 2:646233/1‑234 AGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2363290‑2363456 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgggAGCCTGCCCCCAGCGCCGGCAATCTGGATGAGATCCTTCGCGGTTTCGGCTGGACCATCACCCTCTACGACCTGGATGACATCCAGGAGCTGCGTCCATTGTTCAGCCCTTCCCCGCTGACCCCGCGCATGCTCGACAACTACCGCCTGCTCGACGACGAATACCGCAGCAGCCTGCCCACAATCGATATCGCCCGCTTCATCCAGCCTTCCGACGCCCCGC < AE015451/2363464‑2363243 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |