New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 236345642 (0.730)3 (0.050) 3/332 NT 6.9% coding (421/2724 nt) PP_2076 conserved protein of unknown function
?AE015451 = 2363464 40 (0.710)coding (413/2724 nt) PP_2076 conserved protein of unknown function

GCGGGGCGTCGGAAGGCTGGATGAAGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGCAATTTGGGCAGGCGGGCACGTTG  >  AE015451/2363243‑2363678
                                                                                                                                                                                                                             |                                                                                                                                                                                                                      
gCGGGGCGTCGGAAGGCTGGATGAAGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTcccagcgccggc                                                                                                                                                                                                            >  2:646233‑M2/1‑222 (MQ=255)
      cGTCGGAAGGCTGGATGAAGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGGCgctgct                                                                                                                                                                                                     >  1:5337/1‑235 (MQ=255)
        tCGGAAGGCTGGATGAGGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCgc                                                                                                                                                                                                         <  2:423184/229‑1 (MQ=255)
            aaGGCTGGATGAAGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGt                                                                                                                                                                                                            <  1:38339/222‑1 (MQ=255)
             aGGCTGGATGAAGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTAca                                                                                                                                                                                             <  1:52794/236‑1 (MQ=255)
                                  atCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGcc                                                                                                                                                                         <  1:922679/235‑1 (MQ=255)
                                   tCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTAca                                                                                                                                                                                             <  1:34376/214‑1 (MQ=255)
                                               aGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGctgctg                                                                                                                                                                                                    >  1:795323/1‑195 (MQ=255)
                                                    gctgcGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCt                                                                                                                                                                                                                        >  1:780581/1‑170 (MQ=255)
                                                    gctgcGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCt                                                                                                                                                                                                                        <  2:780578/170‑1 (MQ=255)
                                                    gctgcGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGc                                                                                                                                                            >  2:389936/1‑230 (MQ=255)
                                                         ggTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCg                                                                                                                                                 >  1:544861/1‑236 (MQ=255)
                                                                         cAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCgc                                                                                                                                                                                                         <  1:40410/164‑1 (MQ=255)
                                                                                   ttGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGa                                                                                                                        <  1:1019972/235‑1 (MQ=255)
                                                                                    tGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGAt                                                                                                                       >  1:933127/1‑235 (MQ=255)
                                                                                        gtgCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATcagc                                                                                                                   <  1:47726/233‑1 (MQ=255)
                                                                                         aGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTcccagcgccggcaatctggatgagatccttcgcggtttcggctggaccatca                                                                                                                                                                    <  1:138714‑M2/185‑53 (MQ=255)
                                                                                         aGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATcagcag                                                                                                                 >  1:885756/1‑236 (MQ=255)
                                                                                                                  ggCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAg                                                                                          >  1:686586/1‑234 (MQ=255)
                                                                                                                          aaTGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCACAGGGCGGAt                                                                                   >  2:928344/1‑233 (MQ=255)
                                                                                                                           cgggacGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTcccagcgccggcaatctggatgagatccttcgcggtttc                                                                                                                                                                                 >  2:138712‑M2/3‑99 (MQ=255)
                                                                                                                                cGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTAcagcag                                                                                                                                                                                         <  1:34425/125‑1 (MQ=255)
                                                                                                                                    gCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGa                                                                       >  1:845017/1‑235 (MQ=255)
                                                                                                                                           gATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCa                                                               <  1:724580/236‑1 (MQ=255)
                                                                                                                                                     aGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGAc                                                     >  1:386917/1‑236 (MQ=255)
                                                                                                                                                         cGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGcc                                                                                                                                                                         >  2:884397/1‑116 (MQ=255)
                                                                                                                                                         cGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGcc                                                                                                                                                                         <  1:884400/116‑1 (MQ=255)
                                                                                                                                                          gTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGcc                                                                                                                                                                         <  2:493283/115‑1 (MQ=255)
                                                                                                                                                          gTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGcc                                                                                                                                                                         >  1:493286/1‑115 (MQ=255)
                                                                                                                                                          gTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCt                                                >  1:450584/1‑236 (MQ=255)
                                                                                                                                                           tAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTg                                               <  1:428412/236‑1 (MQ=255)
                                                                                                                                                              agGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCGGCTGATGTACAGCAGCGAGCCATTGGgcg                                                                                                                                                                           <  2:223590/109‑1 (MQ=255)
                                                                                                                                                                      ggTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCAGTAGTAGGcc                                                                                                                                           >  2:40007/1‑133 (MQ=255)
                                                                                                                                                                        tCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCt                                      >  1:757065/1‑232 (MQ=255)
                                                                                                                                                                            gCCGCAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCg                                                          <  1:339757/208‑1 (MQ=255)
                                                                                                                                                                             ccGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCgcgc                                                                                              >  1:481241/1‑171 (MQ=255)
                                                                                                                                                                              cGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGc                              <  2:386914/234‑1 (MQ=255)
                                                                                                                                                                               gAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCaa                                                                                            <  2:425609/171‑1 (MQ=255)
                                                                                                                                                                                    cgcgAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGCAAt                      >  1:69725/1‑236 (MQ=255)
                                                                                                                                                                                     gcgAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGc                         >  1:484421/1‑232 (MQ=255)
                                                                                                                                                                                         aGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGCAATTTgg                  >  1:754576/1‑235 (MQ=255)
                                                                                                                                                                                               tcATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGCAAttt                    <  2:450581/227‑1 (MQ=255)
                                                                                                                                                                                                   ccAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCg                                                                                      >  2:154593/1‑157 (MQ=255)
                                                                                                                                                                                                              gcgcTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCt                                                >  1:866050/1‑184 (MQ=255)
                                                                                                                                                                                                              gcgcTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGCAATTTGGGCAGGCGGGCACGTtg  >  1:741710/1‑230 (MQ=255)
                                                                                                                                                                                                                             |                                                                                                                                                                                                                      
GCGGGGCGTCGGAAGGCTGGATGAAGCGGGCGATATCGATTGTGGGCAGGCTGCTGCGGTATTCGTCGTCGAGCAGGCGGTAGTTGTCGAGCATGCGCGGGGTCAGCGGGGAAGGGCTGAACAATGGACGCAGCTCCTGGATGTCATCCAGGTCGTAGAGGGTGATGGTCCAGCCGAAACCGCGAAGGATCTCATCCAGATTGCCGGCGCTGGGGGCAGGCTCCCAGGGGGCGTCGCTGCTGATGTACAGCAGCGAGCCATTGGGCGCCACGCGGTACTGGCTGTGCCATTCGTAGGCCGGTGCGCTATGGCGCTTGATCAGCAGGTAGAGAAAGCCCTCGCGCAAAGGGCGGATGGCGTAGCTGGAATGGGTCAGCTCGCCGACATCCTGGAACGGGCTGAGATAGCCCGGCAATTTGGGCAGGCGGGCACGTTG  >  AE015451/2363243‑2363678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.