New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2436352 = | 0 (0.000) | 10 (0.190) | 5/320 | NT | 87.0% | coding (896/966 nt) | PP_2134 | transposase |
? | AE015451 | = 6038060 | 3 (0.060) | coding (921/966 nt) | PP_5290 | transposase |
GACCAGCCTGGATGCCCCCGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2436593‑2436352 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaggccgaCTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATGGGGATTTCCTTT < AE015451/6038060‑6037848 GACCAGCCTGGATGCCCCCGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCA > 1:353948/1‑236 GCCTGGATGCCCCCGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCG > 1:289991/1‑236 CCGTAGGAGATTCTATGGCCGGATGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCG < 1:991620/224‑1 ATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCAT > 1:69354/1‑203 GCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCAT > 1:924092/1‑193 AACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG < 2:668806/192‑1 ACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG < 2:886153/191‑1 GGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCG > 2:177693/1‑175 tcgCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCACCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG < 1:930467/174‑1 gTCGAGGTACGAGTCAGCGTGCCAGGGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAGCCC < 2:535023/169‑1 TCGAGGTACGAGTCAGCGTGCCAGAGAAGTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATC < 2:90282/152‑1 CGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCCGCCGGCCTGCTGCCTCATCCGGCCGc > 2:12006/1‑157 GAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGA < 1:529783/157‑1 GAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGA > 2:529780/1‑157 GCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCG > 2:702420/1‑139 AGAATTTCTCCCCAGCATTGGATACTGCCCGTCTGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG < 1:1004997/142‑1 CCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCAAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG < 2:821648/132‑1 CCCGGCAGTTTGGGCGGGCTGCGTTGCGGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGA < 2:1080330/108‑1 AGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG < 1:484963/109‑1 AGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAG > 2:484960/1‑109 GTTGCAGCCCCAGCCTCACCCGGCCGGCTTGGCACCTCCGGTATATAGCTGGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAGCCCGAGATATATACC < 1:1050929/108‑1 gGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCAAAGCC < 1:33475/101‑1 TCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGC > 1:1061208/1‑185 TCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGC < 2:1061205/185‑1 CAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCCGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTG > 2:156599/1‑86 CAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGC < 2:44107/191‑1 GGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATGGGGATTTC > 2:606611/1‑215 GCCGAGTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTC < 2:799027/137‑1 CCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGCGGCCGATGGa > 2:26697/1‑160 CCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGAc > 2:240964/1‑157 CCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGGAAATTTGACTCCGGC > 2:293002/1‑187 CCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCATCCGGCCATAGACTCTCCTACATGGTGAT > 1:6490/1‑210 CCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGC > 2:354147/1‑59 CGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGA > 2:39600/1‑107 GACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGATGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACGTCGAGGTTGCTGAGAGAGG > 2:413419/1‑151 ACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATGGGGATTTCCTTT > 1:292312/1‑214 GACCAGCCTGGATGCCCCCGTAGGAGATTCTATGGCCGGAGGCAAATTTTCAGTAAAAACGCCATCGGCCTCTCTCAGCAACCTCGAGGTACGAGTCAGCGTGCCAGAGAATTTCTCCCCAGCATTGGATACTGCCCGTCAGTTTGGGCGGGCTGCGTTGCAGCCCCAGCCTCAGCTGGCCGGCTTGGCACCTCCGGTATATATCTCGGGCTTCCAGTCGGCCTGATGCCTCATCAGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2436593‑2436352 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catcaggccgaCTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACATGGGGATTTCCTTT < AE015451/6038060‑6037848 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |