New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2436352 =	0 (0.000)	10 (0.190)	5/320	NT	87.0%	coding (896/966 nt)	PP_2134	transposase
	?	AE015451	= 6038060	3 (0.060)					coding (921/966 nt)	PP_5290	transposase

TGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGG  >  AE015451/2436139‑2436579                                                                                                                                                                                                                      |                                                                                                                                                                                                                                    aaaggaaatccccatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagt                                                                                                                                                                                                                                     >  1:292312‑M1/214‑214 (MQ=255)     gaaatccccatgtaggagattctatggccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCGGcc                                                                                                                                                                                                                                >  2:606611‑M1/210‑215 (MQ=255)        atcaccatgtaggagagtctatggccggatgcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCgg                                                                                                                                                                                                                                  >  1:6490‑M1/207‑210 (MQ=255)                               gccggagtcaaatttccagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCgg                                                                                                                                                                                                                                  >  2:293002‑M1/184‑187 (MQ=255)                               gccggaggcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCGGCCtg                                                                                                                                                                                                                              <  2:44107‑M1/8‑1 (MQ=255)                                      gcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCGGCCtga                                                                                                                                                                                                                             >  1:1061208‑M1/177‑185 (MQ=255)                                      gcaaattttcagtaaaaacgccatcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCGGCCtga                                                                                                                                                                                                                             <  2:1061205‑M1/9‑1 (MQ=255)                                                         tccatcggccgctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCgg                                                                                                                                                                                                                                  >  2:26697‑M1/158‑161 (MQ=255)                                                            gtcggcctctctcagcaacctcgaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCgg                                                                                                                                                                                                                                  >  2:240964‑M1/155‑158 (MQ=255)                                                                 cctctctcagcaacctcgacgtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcatcagctggccggcttggcacctccggtatatatctcgggcttccagTc                                                                                                                                                                                                                                    >  2:413419‑M1/150‑151 (MQ=255)                                                                                  gaggtacgagtcagcgtgccagagaatttctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccacTCGGc                                                                                                                                                                                                                                 <  2:799027‑M1/5‑1 (MQ=255)                                                                                                              tctccccagcattggatactgcccgtcagtttgggcgggctgcgttgcagccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCg                                                                                                                                                                                                                                   >  2:39600‑M1/105‑107 (MQ=255)                                                                                                                                        cagtttgggcgggctgcgttgcagccccagcctcagcgggccggcttggcacctccggtatatatctcgggcttccagTCGGCCtg                                                                                                                                                                                                                              >  2:156599‑M1/79‑86 (MQ=255)                                                                                                                                                               gccccagcctcagctggccggcttggcacctccggtatatatctcgggcttccagTCgg                                                                                                                                                                                                                                  >  2:354147‑M1/56‑59 (MQ=255)                                                                                                                                                                                  ggctttgcacctccggtatatatctcgggcttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGgccc                                                                                                                                                                    <  1:33475‑M1/66‑2 (MQ=255)                                                                                                                                                                                                ggtatatatctcgggcttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCCAGCTATATACCGGAGGTGCCAAGCCGGCCGGGTGAGGCTGGGGCTGCAAc                                                                                                                                                <  1:1050929‑M1/86‑1 (MQ=255)                                                                                                                                                                                                            gggcttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCCCTGGCACGCTGACTCGTACCTCgac                                                                      <  2:535023‑M1/160‑2 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTTGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTggg                                                                                                         <  2:821648‑M1/125‑1 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGGTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTgctgcga                                                            <  1:930467‑M1/170‑4 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACt                                                                                                                                >  2:484960‑M1/8‑109 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACt                                                                                                                                <  1:484963‑M1/102‑1 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGtt                                             <  2:668806‑M1/185‑1 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGt                                              <  2:886153‑M1/184‑1 (MQ=255)                                                                                                                                                                                                               cttccagTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACAGACGGGCAGTATCCAATGCTGGGGAGAAATtct                                                                                               <  1:1004997‑M1/135‑1 (MQ=255)                                                                                                                                                                                                                 ggCCTTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACggggg  <  2:1016286/233‑1 (MQ=31)                                                                                                                                                                                                                      TCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTc                                                                         <  1:529783‑M1/157‑1 (MQ=255)                                                                                                                                                                                                                      TCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTc                                                                         >  2:529780‑M1/1‑157 (MQ=255)                                                                                                                                                                                                                      TCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCCGCAACGCAGCCCGCCCAAACTGCCggg                                                                                                                          <  2:1080330‑M1/108‑1 (MQ=255)                                                                                                                                                                                                                      |                                                                                                                                                                                                                                    TGGATGTAACGGTTTCCCAATCCGGTAAATGGGCAGGCAGAGGGAAGTTGAGCAAGCGCGGAGACTCGGAGGTCCGTAGACTCCTGTACAACGCCTCGATGAGCGGCAGTCGAACCGCGACCTGGAAGCAGTATTACGCCCATCACCAAGCCCGGGGGAAGAAAACCACTCAAGCCTTGGTGATCCTTGCACGTCGCTTGGCTCGGCTGGCCTTCGGCCTGATGAGGCATCAGGCCGACTGGAAGCCCGAGATATATACCGGAGGTGCCAAGCCGGCCAGCTGAGGCTGGGGCTGCAACGCAGCCCGCCCAAACTGACGGGCAGTATCCAATGCTGGGGAGAAATTCTCTGGCACGCTGACTCGTACCTCGAGGTTGCTGAGAGAGGCCGATGGCGTTTTTACTGAAAATTTGCCTCCGGCCATAGAATCTCCTACGGGGG  >  AE015451/2436139‑2436579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.