| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 2475763 | 57 (0.990) | 3 (0.050) | 3/328 | NT | 5.1% | coding (606/1011 nt) | dusA | tRNA‑dihydrouridine synthase A |
| ? | AE015451 | = 2475772 | 56 (1.010) | coding (597/1011 nt) | dusA | tRNA‑dihydrouridine synthase A | |||||
AAGGCCGCAGTTGCGCCAATGCCTCGCTACGGCTGACCACCGGCGCATCGCTGCCAAACAGTTGCTGGTCCACCTCGGCCAGCAGATAAGGGTTGTGATACGCCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2475540‑2475763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGCGCGAGGCGTATCACAACCCTTATCTGCTGGCCGAGGTGGACCAGCAACTGTTTGGCAGCGATGCGCCGGTGGTCAGCCGTAGCGAGGCATTGGCGCAACTGCGGCCTT < AE015451/2475772‑2475540 AAGGCCGCAGTTGCGCCAATGCCTCGCTACGGCTGACCACCGGCGCATCGCTGCCAAACAGTTGCTGGTCCACCTCGGCCAGCAGATAAGGGTTGTGATACGCCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGC < 1:761923/220‑1AAGGCCGCAGTTGCGCCAATGCCTCGCTACGGCTGACCACCGGCGCATCGCTGCCAAACAGTTGCTGGTCCACCTCGGCCAGCAGATAAGGGTTGTGATACGCCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGC > 2:761920/1‑220 GGCTGACCACCGGCGCATCGCTGCCAAACAGTTGCTGGTCCACCTCGGCCAGCAGATAAGGGTTGTGATACGCCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCG < 2:1063501/189‑1 AACAGTTGCTGGTCCACCTCGGCCAGCAGATAAGGGTTGTGATACGCCTCGCGCCCCAGCATCACGCCCTCGAAGGGTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGtt > 2:773782/1‑168 TCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTG > 1:382947/1‑154 CCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGCCTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGg > 2:313834/1‑99 CCGGGAAGTCCCTCTTCAACTGCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGCGCGAGGCGTATCACAACCCTTATCTGCTGGCCGAGGTGGACCAG > 1:262512/1‑198 GCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGCGCGAGGCGTATCACAACCCTTATCTGCTGGCCGAGGTGGACCAGCAACTGTTTGGCAGCGATGCGCCGGTGGTCAGCCGTAGCGAGGCATTGGCGCAA < 2:290505/229‑1 TGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGCGCGAGGCGTATCACAACCCTTATCTGCTGGCCGAGGTGGACCAGCAACTGTTTGGCAGCGATGCGCCGGTGGTCAGCCGTAGCGAGGCATTGGCGCAACTGCGGCC < 1:754471/235‑1 CGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGCGCGAGGCGTATCACAACCCTTATCTGCTGGCCGAGGTGGACCAGCAACTGTTTGGCAGCGATGCGCCGGTGGTCAGCCGTAGCGAGGCATTGGCGCAACTGCGGCCTT < 1:26485/235‑1 CGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGC < 1:1007212/127‑1 CGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGC > 2:1007209/1‑127 CGCTATCACATCGCAGCGCAGTTGAAG > 2:178312/1‑27 AAGGCCGCAGTTGCGCCAATGCCTCGCTACGGCTGACCACCGGCGCATCGCTGCCAAACAGTTGCTGGTCCACCTCGGCCAGCAGATAAGGGTTGTGATACGCCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2475540‑2475763‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgcgCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACACCTTGAAACCTTCGATGGCGTGATGCTGGGGCGCGAGGCGTATCACAACCCTTATCTGCTGGCCGAGGTGGACCAGCAACTGTTTGGCAGCGATGCGCCGGTGGTCAGCCGTAGCGAGGCATTGGCGCAACTGCGGCCTT < AE015451/2475772‑2475540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |