New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2508922	36 (0.620)	3 (0.060)	3/310	NT	8.6%	coding (193/429 nt)	PP_2203	conserved protein of unknown function
	?	AE015451	= 2508906	31 (0.590)					coding (209/429 nt)	PP_2203	conserved protein of unknown function

TGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2508680‑2508922 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtggcgccacgccTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGAGATGGGTGACCACAAGGATGCCTACCAGGTCATCGGGGTGACCCAGGATGGCCAGGACACCGTGGTCGCCAACTACTGATGCTCAGCCTAGG  <  AE015451/2508906‑2508673                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCG                                                                                                                                                                                                                                                   >  1:397985/1‑236                                    CATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCAC                                                                                                                                                                                                                                               <  2:684519/205‑1                                                     ATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGC                                                                                                                                                                                                                                                    >  1:327376/1‑183                                                                       TTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCG                                                                                                                                                                                                                                                        >  1:168562/1‑161                                                                                                                    GGCACCGCAGGGCCCGTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCTCGTGGCCTTCGACGAACTTGCCGCCGATCCCCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCTTGCGTCGTGCC                                                                                                                                                                                                                                <  2:933918/140‑1                                                                                                                       cCCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAG                                                                                                                                                                                                                                                           <  1:253841/109‑1                                                                                                                                                                                           GACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCTTGCGTCGTGCCACGCCGGGGTGATCGGC                                                                                                                                                                                                               <  2:231842/86‑1                                                                                                                                                                                                         CGATCGCCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGC                                                                                                                                                                                      <  1:274056/97‑1                                                                                                                                                                                                                                      CGTGGCGCCACGCCTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGAGATGGGTGACCACAAGGATGCCTACCAGGTCATCGGGGTGACCCAGGATGGCCAGGACACCGTGGTCGCCAACTACTGAT              <  1:197053/236‑1                                                                                                                                                                                                                                              CACGCCTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGCGATGGGTGACCCCAAGGATGCCTACCAGGg                                                                >  2:1058242/1‑177                                                                                                                                                                                                                                               ACGCCTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGAGATGGGTGACCACAAGGATGCCTACCAGGTCATCGGGGTGACCC                                                  <  2:390286/191‑1                                                                                                                                                                                                                                                 GCCTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGAGATGG                                                                                         >  1:994327/1‑150                                                                                                                                                                                                                                                  CCTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGAGATGGGTGACCACAAGGATGCCTACCAGGTCATCGGGGTGACCCAGGATGGCCAGGACACCGTGGTCGCCAACTACTGATGCTCAGCCTAGG  >  1:841354/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2508680‑2508922 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtggcgccacgccTTGCGTCGTGCCACACCGGGGTGATCGGCGGCAAGTTCGTCGAAGGCCACGTGCCGGCCGAGCAGGTGCGCCTGCTGGCCAAACGCAACGACCTCAAGGGCCTGGCGGTGCCGGGCATGCCCATGGGCTCGCCCGGCATGGAGATGGGTGACCACAAGGATGCCTACCAGGTCATCGGGGTGACCCAGGATGGCCAGGACACCGTGGTCGCCAACTACTGATGCTCAGCCTAGG  <  AE015451/2508906‑2508673

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.