New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2566600 =	55 (0.950)	4 (0.070)	4/320	NT	7.3%	coding (352/1932 nt)	pctB	Methyl‑accepting chemotaxis protein PctB
	?	AE015451	2566704 =	50 (0.930)					coding (248/1932 nt)	pctB	Methyl‑accepting chemotaxis protein PctB

CAGTCCGGTGCACTGACCGCCAGCAGTGTGCAGAACTGGATGAGCGGGCGCATTCTGGTGCTGGAGAACCTGGCCCAGGACATCGGCCAGCAAGGCGCCGGCGACACCCTGGCAGGGCTGATCGAGCAGCCGTCCTACACGCGTAATTTCCTGTTCACCTACCTGGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2566771‑2566600 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggccaggTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCACCGGACTGCTGCACCGAGGCTTCGATATTCTGGCGGATGGTATTGCGTTGCAGGTAGTCGTTGTAGAGCGTGAACAGGGCAAATGCCAAAACCACGACGCCGCAGGCGCTGAGCAGGATCTTGTGGCGAAATTTCAGGTTCATGTTTCGAGACCTTGAGC  >  AE015451/2566704‑2566923                                                                                                                                                                                                                                                                                                                                                                                                          CAGTCCGGTGCACTGACCGCCAGCAGTGTGCAGACCTGGATGAGCGGGCGCATTCTGGTGCTGGAGAACCTGGCCCAGGACATCGGCCAGCAAGGCGCCGGCGACACCCTGGCAGGGCTGATCGAGCAGCCGTCCTACACGCGTAATTTCCTGTTCACCTACCTGGGCC                                                                                                                                                                                                                                 <  2:710653/169‑1                                            GCGGGCGCATTCTGGTGCTGGAGAACCTGGCCCAGGACATCGGCCAGCAAGGCGCCGGCGACACCCTGGCAGGGCTGATCGAGCAGCCGTCCTACACGCGTAATTTCCTGTTCACCTACCTGGGCCAGGTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCT                                                                                                                                                                                         <  1:776609/166‑1                                                                                    CGGCCAGCAAGGCGCCGGCGACACCCTGGCAGGGCTGATCGAGCAGCCGTCCTACACGCGTAATTTCCTGTTCACCTACCTGGGCCAGGTTCTCCAGCACCAGAATGCGCCCGCTCATCC                                                                                                                                                                                               <  2:296032/120‑1                                                                                         AGCAAGGCGCCGGCGCCACCCTGGCAGGGCTGATCGAGCAGCCGTCCTACACGCGTACTTTCCTGTTCACCTACCTGGGCCAGCTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTG                                                                                                                                                                              <  1:978908/132‑1                                                                                                                                    GTCCTACACGCGTAATTCCCCGTTCCCCTACCTGGGCCAGGTCCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCACC                                                                                                                                                                <  2:917133/103‑1                                                                                                                                                                       GCCAGGTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCACCGGACTGCTGCACCGAGGCTTCGATATTCTGGCGGATGGTATTGCGTTGCAGGTAGTCGTTGTAGAGCGTGAACAGGGCAAATGCCAAAACCACGACGCCGCAGGCGCTGAGCAGGATCTTGTGGCGACATTTCAGGGTCATGTTTCGAGACCTTGAGC  >  1:98730/1‑226                                                                                                                                                                          AGGTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCACCGGACTGCTGCACCGAGGCTTCGATATTCTGGCGGATGGTATTGCGTTGCAGGTAGTCGTTGTAGAGCGTGAACAGGGCAAATGCCAAAACCACGACGCCGCAG                                                         <  1:1085037/168‑1                                                                                                                                                                           cGTTCTCCAGCACGAGAATGCGCCCGCGCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCGCCGGACTGCTGCACCGAGGCTTCGATATTCTGGCGGATGGTATTGCGTTGCAGGTAGTCGT                                                                                                     <  2:979388/122‑1                                                                                                                                                                            GTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCACCGGACTGCTGCACCGAGGCTTCGATATTCTGGCGGATGGTATTGCGTTGCAGGTAGTCGTTGTAGAGCGTGAACAGGGCAAATGC                                                                            <  1:127532/147‑1                                                                                                                                                                                                                                                                                                                                                                                                          CAGTCCGGTGCACTGACCGCCAGCAGTGTGCAGAACTGGATGAGCGGGCGCATTCTGGTGCTGGAGAACCTGGCCCAGGACATCGGCCAGCAAGGCGCCGGCGACACCCTGGCAGGGCTGATCGAGCAGCCGTCCTACACGCGTAATTTCCTGTTCACCTACCTGGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2566771‑2566600 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgggccaggTTCTCCAGCACCAGAATGCGCCCGCTCATCCAGTTCTGCACACTGCTGGCGGTCAGTGCACCGGACTGCTGCACCGAGGCTTCGATATTCTGGCGGATGGTATTGCGTTGCAGGTAGTCGTTGTAGAGCGTGAACAGGGCAAATGCCAAAACCACGACGCCGCAGGCGCTGAGCAGGATCTTGTGGCGAAATTTCAGGTTCATGTTTCGAGACCTTGAGC  >  AE015451/2566704‑2566923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.