New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 4244793 = | 45 (0.780) | 7 (0.130) | 6/328 | NT | 13.7% | coding (228/1191 nt) | aruH | Arginine‑‑pyruvate transaminase AruH |
? | AE015451 | 4244808 = | 45 (0.810) | coding (213/1191 nt) | aruH | Arginine‑‑pyruvate transaminase AruH |
GCGCTACGCCAAGCTCACCCAACGCATCGCCGGCGACGGCGCTGCGGCCTGGGACATCCACTACCGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4245018‑4244793 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGCCTGCAGCGCCAGGGCGCGGTAGTGGATGTCCCAGGCCGCAGCGCCGTCGCCGGCGATGCGTTGGGTGAGCTTGGCGTAGCGCATGGCAATCTCCTTTCAATG > AE015451/4244808‑4245038 GCGCTACGCCAAGCTCACCCAACGCATCGCCGGCGACGGCGCTGCGGCCTGGGACATCCACTACCGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGT < 1:379358/236‑1 CGCTACGCCAAGCTCACCCAACGCATCGCCGGCGACGGCGCTGCGGCCTGGGACATCCACTACCGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGTA < 1:1041611/236‑1 TGCGGCCTGGGACCTCCCCTACCGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGGC < 1:330312/216‑1 CGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAG > 1:1057036/1‑162 CGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAG < 2:1057033/162‑1 GCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGT < 1:457292/161‑1 ATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGC < 2:408439/130‑1 TGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCC > 1:523475/1‑123 TGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCC < 2:523472/123‑1 TGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATGG < 2:461873/153‑1 gGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGTACATCGGCGTAATGGG < 1:709851/144‑1 CCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAGCTTGCCGCGTACATCGGCGTAATGGGTATG < 2:963951/135‑1 CAGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGT > 2:321407/1‑83 AGCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGCCTGCAGCGCCAGGGCGCGGTAGTGGATGTCCCAGGCCGCAGCGCCGTCGCCGGCGATGCGTTGGGTGAGCTTGGCGTAGCGCATGGCAATCTCCTTTCAATG > 2:690859/1‑233 GCGCTACGCCAAGCTCACCCAACGCATCGCCGGCGACGGCGCTGCGGCCTGGGACATCCACTACCGCGCCCTGGCGCTGCAGGCTGAGGACAAGGACATCCTGCTGCTGTCGGTGGGTGACCCGGACTTCGACACTCCCGCGCCTATCGTCGAGGCGGCCATCGACAGCCTGCGCGCTGGCCATACCCATTACGCCGATGTACGCGGCAAGCTGGCGCTGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4245018‑4244793 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccagCTTGCCGCGTACATCGGCGTAATGGGTATGGCCAGCGCGCAGGCTGTCGATGGCCGCCTCGACGATAGGCGCGGGAGTGTCGAAGTCCGGGTCACCCACCGACAGCAGCAGGATGTCCTTGTCCTCAGCCTGCAGCGCCAGGGCGCGGTAGTGGATGTCCCAGGCCGCAGCGCCGTCGCCGGCGATGCGTTGGGTGAGCTTGGCGTAGCGCATGGCAATCTCCTTTCAATG > AE015451/4244808‑4245038 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |