New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4332228	33 (0.570)	4 (0.070)	3/324	NT	11.4%	coding (32/864 nt)	PP_3804	conserved exported protein of unknown function
	?	AE015451	= 4332298	31 (0.570)					coding (102/864 nt)	PP_3804	conserved exported protein of unknown function

CCGCCGCTCGCCTGGTCAGCCAGTCGCTCAAGGGCTTTTTCTTCCTGTCGGTGCTGATTGCCACCATCAGTACCCTGTTCGGCATCCTGCTACCGATCGTTTTCGACCTGCCGGTGCCGTCAGGGGCCGCGATCATCCTGGTCGCCGGCATCTGCTTTGCTCTGGCCGCTCTGGCCCGCGCGCTCGTTCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTGGCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4331986‑4332228 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctggcCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGGATGCCGA  <  AE015451/4332298‑4332064                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGCCGCTCGCCTGGTCAGCCAGTCGCTCAAGGGCTTTTTCTTCCTGTCGGTGCTGATTGCCACCATCAGTACCCTGTTCGGCATCCTGCTACCGATCGTTTTCGACCTGCCGGTGCCGTCAGGGGCCGCGATCATCCTGGTCGCCGGCATCTGCTTTGCTCTGGCCGCTCTGGCCCGCGCGCTCGTTCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTG                                                                                                                                                                                                                                                     >  2:996294/1‑235                                                                         CCCTGTTCGGCATCCTGCTACCGATCGTTTTCGACCTGCCGGTGCCGTCAGGGGCCGCGATCATCCTGGTCGCCGGCATCTGCTTTGCTCTGGCCGCTCTGGCCCGCGCGCTCGTTCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTGGCGCTGGCCAGGCTATGAGTGACCG                                                                                                                                                                                                                            <  2:939778/188‑1                                                                               TCGGCATCCTGCTACCGATCGTTTTCGACCTGCCGGTGCCGTCAGGGGCCGCGATCATCCTGGTCGCCGGCATCTGCTTTGCTCTGGCCGCTCTGGCCCGCGCGCTCGTTCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTGGCGCTGGCCAGGCTATGAGTGACCGGCAG                                                                                                                                                                                                                        >  2:1044021/1‑186                                                                                                                                       ATCCTGGTCGCCGGCATCTGCTTTGCTCTGGCCGCTCTGGCCCGCGCGCTCGTTCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTGGCGCTGGCCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAG                                                                                                                                                                        <  2:370055/178‑1                                                                                                                                                                                        cCGTCCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTGGCGCTGGCCAGGCTATGAGTGACCG                                                                                                                                                                                                                            <  2:211883/76‑1                                                                                                                                                                                                                                                TGGCCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGG         <  1:589157/232‑1                                                                                                                                                                                                                                                  GCCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGGATGCC    <  1:615692/235‑1                                                                                                                                                                                                                                                  GCCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGGATGCC    <  1:646844/235‑1                                                                                                                                                                                                                                                  GCCAGGCGATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGGATGCC    <  1:933512/235‑1                                                                                                                                                                                                                                                   CCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGGATGCCGA  >  1:744606/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCGCCGCTCGCCTGGTCAGCCAGTCGCTCAAGGGCTTTTTCTTCCTGTCGGTGCTGATTGCCACCATCAGTACCCTGTTCGGCATCCTGCTACCGATCGTTTTCGACCTGCCGGTGCCGTCAGGGGCCGCGATCATCCTGGTCGCCGGCATCTGCTTTGCTCTGGCCGCTCTGGCCCGCGCGCTCGTTCCCCGCCTGCAAGGAAACCCGGCATGAACTTCAAACACCTGACCCTGGCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4331986‑4332228 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctggcCAGGCTATGAGTGACCGGCAGGGTCGTCAGCACTTGCGTGGCGAAAGACAGGGACGGCAGGCCGGCCAGTGCCAGCGCCAGGGTCAGGTGTTTGAAGTTCATGCCGGGTTTCCTTGCAGGCGGGGAACGAGCGCGCGGGCCAGAGCGGCCAGAGCAAAGCAGATGCCGGCGACCAGGATGATCGCGGCCCCTGACGGCACCGGCAGGTCGAAAACGATCGGTAGCAGGATGCCGA  <  AE015451/4332298‑4332064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.