New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 4604194 = | 51 (0.880) | 5 (0.090) | 5/322 | NT | 10.1% | coding (24/411 nt) | PP_4076 | conserved protein of unknown function |
? | AE015451 | 4604216 = | 41 (0.760) | coding (46/411 nt) | PP_4076 | conserved protein of unknown function |
TGGATGCGCGGTTCAAAGCGCTGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4604430‑4604194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccgccatcCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCA > AE015451/4604216‑4604444 TGGATGCGCGGTTCAAAGCGCTGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCA < 1:746954/235‑1 GATGCGCGGTTCAAAGCGCTGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGGTGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATC < 1:599548/235‑1 GATGCGCGGTTCAAAGCGCTGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATC < 1:1070020/235‑1 CAAAGCGCTGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCC > 2:493106/1‑221 TGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATCCGGGAGGCGTCTCGCCAGG < 1:931580/235‑1 GGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGCCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGCCGGGCCCGCCAT > 2:947014/1‑195 TCGCCGCTGCTGCCGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGAGGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATCCGGGAGG < 2:198700/181‑1 tcgGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCG < 2:921095/156‑1 ctgGGCGAGCGTTCAGCAACGTTTCGGGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTC < 1:43106/133‑1 TGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTC < 2:219952/93‑1 CCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCA < 2:665112/234‑1 TGGATGCGCGGTTCAAAGCGCTGGAGGGTACGGCGGATATCGGCGCTCACTTGCTGCAGCAGGTCGCCGCTGCTGACGTCATGCCCGTTGAAGTCGCGCAGGCCCAGCTCGGGGCTGCTCTGGGAGCAACCTTGGCGAGCGTTCAGCAACGTTTCGAGGTGGCACTTGATGGCCGCGAACTTGTGCGAAGCGCTTTCCTGGCGAGACGCCTCCCGGATGGCGGACGGGTCCGCCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/4604430‑4604194 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccgccatcCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATCCACGTGCGCGCGCTCA > AE015451/4604216‑4604444 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |