New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 4604194 =51 (0.880)5 (0.090) 5/322 NT 10.1% coding (24/411 nt) PP_4076 conserved protein of unknown function
?AE015451 4604216 = 41 (0.760)coding (46/411 nt) PP_4076 conserved protein of unknown function

AACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATC  >  AE015451/4603965‑4604428
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          
tgagcgcgcgcacgtggatgcgcggttcaaagcgctggagggtacggcggatatcggcgctcacttgctgcagcaggtcgccgctgctgacgtcatgcccgttgaagtcgcgcaggcccagctcggggctgctctgggagcaaccttggcgagcgttcagcaacgtttcgaggtggcacttgatggccgcgaacttgtgcgaagcgctttcctggcgagacgcctcccgGATgg                                                                                                                                                                                                                                        <  2:665112‑M1/5‑1 (MQ=255)
                aaTACGTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATcc                                                                                                                                                                                                                      >  1:497529/1‑236 (MQ=255)
                  tACGTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCa                                                                                                                                                                                                                         <  2:927528/231‑1 (MQ=255)
                  tACGTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCg                                                                                                                                                                                                                     <  1:261406/235‑1 (MQ=255)
                    cGTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGACTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGAcc                                                                                                                                                                                                                                  <  2:579960/220‑1 (MQ=255)
                     gTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAg                                                                                                                                                                                                                 >  1:514250/1‑236 (MQ=255)
                       cGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAgg                                                                                                                                                                                                                <  1:672961/235‑1 (MQ=255)
                               aGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCg                                                                                                                                                                                                                     >  1:1081609/1‑222 (MQ=255)
                                              ccGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGc                                                                                                                                                                                                                                       >  2:1039738/1‑189 (MQ=255)
                                              ccGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGc                                                                                                                                                                                                                                       <  1:1039741/189‑1 (MQ=255)
                                              ccGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCTGACCCGTCCGCCATCCGGGAGGCGGCTCGCCAGGAAAGCGCTTCg                                                                                                                                                                                         >  1:464221/1‑235 (MQ=255)
                                                      cgcAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCg                                                                                                                                                                                                                     <  2:381642/199‑1 (MQ=255)
                                                                   cGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGACGCGTCTCGCCAGGAAAgc                                                                                                                                                                                               >  1:897752/1‑208 (MQ=255)
                                                                      tGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGtct                                                                                                                                                                                                           <  1:901696/193‑1 (MQ=255)
                                                                                 aGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTc                                                                                                                                                           <  2:514247/230‑1 (MQ=255)
                                                                                          gTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCgg                                                                                                                                                                            <  2:987987/204‑1 (MQ=255)
                                                                                           tctcGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGcc                                                                                                                                                                          <  1:82124/205‑1 (MQ=255)
                                                                                                gACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCCGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCaa                                                                                                                                                                     <  1:832149/205‑1 (MQ=255)
                                                                                                    gggCGGGTGATCCGGGCGGGTCCCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGa                                                                                                                                              <  2:305906/223‑1 (MQ=255)
                                                                                                        gggTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAgg                                                                                                                                 >  2:787397/1‑233 (MQ=255)
                                                                                                             aTCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCg                                                                                                                                                          <  2:497526/203‑1 (MQ=255)
                                                                                                              tCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGc                                                                                                                             <  1:77374/231‑1 (MQ=255)
                                                                                                                  ggCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACCTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATc                                                                                                                                                                                                                       <  2:201431/137‑1 (MQ=255)
                                                                                                                   gCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCagag                                                                                                                     >  1:616764/1‑234 (MQ=255)
                                                                                                                    cTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGagcag                                                                                                                  <  1:623037/236‑1 (MQ=255)
                                                                                                                     tGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGagcag                                                                                                                  <  1:698111/235‑1 (MQ=255)
                                                                                                                          ccAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCCGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGt                                                                                                                                                                                  <  2:922331/166‑1 (MQ=255)
                                                                                                                           cAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGc                                                                                                                                          >  2:737156/1‑205 (MQ=255)
                                                                                                                           cAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGa                                                                                                            >  1:822681/1‑235 (MQ=255)
                                                                                                                                     tcgcCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGa                                                                                                                                                                                                                                    >  2:941656/1‑105 (MQ=255)
                                                                                                                                     tcgcCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTgc                                                                                                 >  1:702469/1‑236 (MQ=255)
                                                                                                                                         cGTGCGCCCGCACTTCAAGTACAAGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGCCTCGACACGCAATGAGTGGTTTCTTCGATCGGTTGATGGCGGAcc                                                                                                                                                                                                                                  <  1:202025/103‑1 (MQ=255)
                                                                                                                                                              cATGGGCGCGACCTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCaa                                                                                                                                   <  2:1039590/177‑1 (MQ=255)
                                                                                                                                                                 gggCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGAc                                                                                            >  2:455219/1‑213 (MQ=255)
                                                                                                                                                                   gcgcGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACggg                                                                                   >  2:713794/1‑220 (MQ=255)
                                                                                                                                                                   gcgcGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAgcg                                                                   >  1:456804/1‑236 (MQ=255)
                                                                                                                                                                   gcgcGAACTTCGAAATTTCCCTGGTAGCCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAgcg                                                                   >  1:563353/1‑236 (MQ=255)
                                                                                                                                                                     gcgAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAgcggc                                                                 >  1:1086168/1‑236 (MQ=255)
                                                                                                                                                                      cgAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGcc                                                                                                                                     >  2:433556/1‑167 (MQ=255)
                                                                                                                                                                         aCTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCaa                                                                                                                                   >  2:508197/1‑166 (MQ=255)
                                                                                                                                                                              gAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACctgctg                                                        <  1:820904/236‑1 (MQ=255)
                                                                                                                                                                                        tGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACctgc                                                          >  2:788146/1‑224 (MQ=255)
                                                                                                                                                                                         ggTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGt                                                <  2:1086165/233‑1 (MQ=255)
                                                                                                                                                                                             cgaacttgtgcgaagcgctttcctggcgagacgcctcccgGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTgctccccga                                                                                                                      <  2:921095‑M1/119‑4 (MQ=255)
                                                                                                                                                                                              gaacttgtgcgaagcgctttcctggcgagacgcctcccgGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGca                                                                                                                                                                                       <  2:219952‑M1/54‑1 (MQ=255)
                                                                                                                                                                                                  gcgcGACACGCAATGAGTGGTTGCTTCGATCGCGTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCg                                                                                                                                                          <  2:294332/115‑1 (MQ=255)
                                                                                                                                                                                                        gaagcgctttcctggcgagacgcctcccgGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCCCGAAACGTTGCTGAACGCtcgcccag                                                                                                                                  <  1:43106‑M1/107‑4 (MQ=255)
                                                                                                                                                                                                                gAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTc                       >  1:733016/1‑235 (MQ=255)
                                                                                                                                                                                                                  cctggcgagacgcctcccgGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCa                     <  1:931580‑M1/216‑1 (MQ=255)
                                                                                                                                                                                                                     gTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAgc                   >  2:477023/1‑234 (MQ=255)
                                                                                                                                                                                                                        tcttcGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCa                                                                                 >  2:539683/1‑169 (MQ=255)
                                                                                                                                                                                                                          ttcGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGa            >  1:919951/1‑236 (MQ=255)
                                                                                                                                                                                                                              cctcccgGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCCTCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGGCAGCAGCGGCGa                                                               <  2:198700‑M1/174‑1 (MQ=255)
                                                                                                                                                                                                                              aTCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTc                       >  1:493109/1‑221 (MQ=255)
                                                                                                                                                                                                                              aTCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAAcc         >  1:665115/1‑235 (MQ=255)
                                                                                                                                                                                                                              aTCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAAc          >  2:557406/1‑234 (MQ=255)
                                                                                                                                                                                                                              aTCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACcg        >  1:652631/1‑236 (MQ=255)
                                                                                                                                                                                                                                 gCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAAc          <  2:822678/231‑1 (MQ=255)
                                                                                                                                                                                                                                     GATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATc  <  1:1070020‑M1/235‑1 (MQ=255)
                                                                                                                                                                                                                                     GATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCACCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATc  <  1:599548‑M1/235‑1 (MQ=255)
                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                          
AACAAATAGATCAAGCAATACGTCGCCGACCAGGAAAACCCTTCGGCCGATGTGCGCAGCCGTCGGCCGCTGCGTGCTGCCAGGGTCGAGGTCTCGGACGTGGCGGGTGATCCGGGCTGGTACCAGGTCTCGCTCGCCGTGCGCCCGCACTTCAAGTACATGGGCGCGAACTTCGAAATTTCCCTGGTAGGCCGGCTCGACACGCAATGAGTGGTTTCTTCGATCGCTTGATGGCGGACCCGTCCGCCATCCGGGAGGCGTCTCGCCAGGAAAGCGCTTCGCACAAGTTCGCGGCCATCAAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGCTTTGAACCGCGCATC  >  AE015451/4603965‑4604428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.