New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 202317	68 (1.180)	4 (0.070)	3/326	NT	5.8%	coding (7823/26049 nt)	PP_0168	putative surface adhesion protein
	?	AE015451	= 208957	NA (NA)					coding (14463/26049 nt)	PP_0168	putative surface adhesion protein

TCAGGTCACCATCAAGGCCGGTGAGACCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAAC  >  AE015451/202087‑202549                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                         tCAGGTCACCATCAAGGCCGGTGAGACCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTg                                                                                                                                                                                                                                     <  1:740784/236‑1 (MQ=255)                  ccGGTGAGACCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCAt                                                                                                                                                                                                                     >  1:748041/1‑235 (MQ=255)                    ggTGAGACCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCAc                                                                                                                                                                                                                  >  1:815830/1‑236 (MQ=255)                       gagaCCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGTAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGCCACCGAAGGCGGTGAGATCACCTACAcc                                                                                                                                                                                                                       >  1:393369/1‑228 (MQ=255)                       gagaCCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCCACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGGGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGCGAGATCACCTacac                                                                                                                                                                                                                        >  1:121969/1‑227 (MQ=255)                         gaCCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCTGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGa                                                                                                                                                                                                             >  1:507490/1‑236 (MQ=255)                             aGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTga                                                                                                                                                                                                                                    <  1:517828/209‑1 (MQ=40)                                gcgcCGTACACCCACGCCGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTg                                                                                                                                                                                                              <  2:832332/228‑1 (MQ=37)                                  gcCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGCAGGCGGTGAGATCACCTACACCAt                                                                                                                                                                                                                     >  2:305282/1‑219 (MQ=38)                                  gcCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAg                                                                                                                                                                                                    <  1:797256/236‑1 (MQ=38)                                        cacCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTc                                                                                                                                                                                              <  1:806629/236‑1 (MQ=39)                                                acgCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTc                                                                                                                                                                                              <  2:412751/228‑1 (MQ=40)                                                              gACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTc                                                                                                                                                                                              <  2:759863/214‑1 (MQ=40)                                                               aCGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGa                                                                                                                                                                        <  2:282277/235‑1 (MQ=38)                                                                cGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCt                                                                                                                                                                                             <  1:439832/213‑1 (MQ=40)                                                                cGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTCGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGa                                                                                                                                                                        <  2:550150/234‑1 (MQ=39)                                                                     aCCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCAACTacac                                                                                                                                                                                                                        >  1:281096/1‑181 (MQ=38)                                                                      ccAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCATCAGGGCGGCAACGCTTCCGTTCAAGTGCCCGTCAGCCTCGGTGAGGAGGGTCAGATGCGTATCAGGACCAGTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATc                                                                                                                                                                                                                    <  2:774464/184‑1 (MQ=11)                                                                       cAGGACGCTGGCCAGATCACCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTAc                                                                                                                                                                 <  2:1028204/234‑1 (MQ=37)                                                                             gCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCt                                                                                                                                                         >  1:105454/1‑236 (MQ=35)                                                                               tGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGa                                                                                                                                                                                                             >  1:61730/1‑182 (MQ=33)                                                                               tGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTg                                                                                                                                                        <  1:550800/235‑1 (MQ=34)                                                                                           ccTGGGCATCACGTCCGCTGTGGATGTAGACAGTCACACCTTCGAGAACCTGCACCTGGGCGGCACCGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGggtcgc                                                                                                                                                                                                                                    <  1:133125‑M1/147‑7 (MQ=255)                                                                                              gggCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCg                                                                                                                                                                                         >  1:779276/1‑187 (MQ=34)                                                                                              gggCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCg                                                                                                                                                                                         <  2:779273/187‑1 (MQ=35)                                                                                              gggCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTa                                                                                                                                                                  >  1:862078/1‑210 (MQ=33)                                                                                              gggCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACGCTGACCAACAAAGACgg                                                                                                                                                                                                >  1:1063778/1‑180 (MQ=21)                                                                                                   tCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaacaa                                                                                                                                                                                                      >  2:525727/1‑169 (MQ=31)                                                                                                   tCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaaca                                                                                                                                                                                                       >  1:73353/1‑168 (MQ=31)                                                                                                    cACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTaca                                                                                                                                                                                                                         <  2:387522/149‑1 (MQ=32)                                                                                                     tcGTACGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAAcc                                                                                                                                                                               <  1:221082/189‑1 (MQ=18)                                                                                                     ccGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTg                                                                                                                                                                                                                                     <  1:815777/135‑1 (MQ=18)                                                                                                     aCGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACcgtcgtcg                                                                                                                                  <  1:456763/235‑1 (MQ=33)                                                                                                     aCGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCGCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCAGCACCCTGACCAACAAAGACGGTc                                                                                                                                                                                              <  2:84536/175‑1 (MQ=18)                                                                                                        tCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGAc                                                                                                                                                      <  2:815827/212‑1 (MQ=33)                                                                                                        tCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAAGTCGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAGGCgg                                                                                                                                                                                                                                       >  2:238456/1‑131 (MQ=12)                                                                                                            cTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGc                                                                                                                           >  1:937441/1‑235 (MQ=35)                                                                                                            cTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCACCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCCAGCTGACCGAc                                                                                                                                                  >  2:164449/1‑212 (MQ=17)                                                                                                              gtgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGACACCGACACCCTCGACGAGGTGGTGGCCAAGCTGACCGCGACCCCTTCGGTGACCGAAGGCGGCGAGATCACCTaca                                                                                                                                                                                                                         >  2:591891/1‑139 (MQ=11)                                                                                                               tgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACAGCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACGCTGACCAACAAAg                                                                                                                                                                                                    >  2:1026891/1‑159 (MQ=17)                                                                                                               tgGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCaa                                                                                                                        >  1:765988/1‑235 (MQ=35)                                                                                                                 gATGTAGACGGTCACACCTGCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATc                                                                                                                                                                                                                    <  2:73351/141‑1 (MQ=17)                                                                                                                  aTGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTg                                                                                                                                                                                            >  1:1012537/1‑164 (MQ=33)                                                                                                                        aCGGTCACACCTTCGAGAACCTGCAACTGGGCGGCACCGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGa                                                                                                                                                                        <  1:150134/178‑1 (MQ=18)                                                                                                                          ggTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGcacca                                                                                                                >  2:1048392/1‑232 (MQ=34)                                                                                                                            tCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCATCTACACCATCACCCTGACCAACAAAGACg                                                                                                                                                                                                 >  2:1058825/1‑149 (MQ=21)                                                                                                                            tCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTacac                                                                                                                                                                                                                        >  2:956291/1‑126 (MQ=32)                                                                                                                               cacCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACcaac                                                                                                                                                                                                        >  2:331550/1‑139 (MQ=32)                                                                                                                                acCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTGACCGAAGGCgg                                                                                                                                                                                                                                       >  2:513507/1‑107 (MQ=17)                                                                                                                                  cTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACcgt                                                                                                                                       <  1:919461/201‑1 (MQ=35)                                                                                                                                    tCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCAc                                                                                                                                                                                                                              <  2:567911/112‑1 (MQ=33)                                                                                                                                    tCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCAc                                                                                                                                                                                                                              >  1:567914/1‑112 (MQ=33)                                                                                                                                    tCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGtt                                                                                                          <  1:924499/228‑1 (MQ=37)                                                                                                                                      gagaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGt                                                                                                                                                                                                                                      <  2:986362/102‑1 (MQ=33)                                                                                                                                      gagaACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTCGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGt                                                                                                                                                                                                                                      >  1:986365/1‑102 (MQ=18)                                                                                                                                         aaCCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGc                                                                                                >  2:1009558/1‑233 (MQ=37)                                                                                                                                         aaCCGGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCGTCGGTCACCGAAGGCGGTGAGAGCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGAcc                                                                                                                                                     <  2:62786/180‑1 (MQ=16)                                                                                                                                                        ggcAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTg                                                                                                                                                                                                              <  1:502571/108‑1 (MQ=33)                                                                                                                                                        ggcAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTg                                                                                                                                                                                                              >  2:502568/1‑108 (MQ=33)                                                                                                                                                        ggcAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGt                                                                              >  1:671660/1‑236 (MQ=255)                                                                                                                                                        ggcAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGt                                                                              >  1:28660/1‑236 (MQ=40)                                                                                                                                                              gCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTa                                                                           <  2:685695/233‑1 (MQ=255)                                                                                                                                                                           tGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGGCGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAAcgcg                                                           >  1:18196/1‑236 (MQ=255)                                                                                                                                                                             aCCGACACCCTCGACGAGGTCGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGCGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACgcgc                                                          <  1:560540/235‑1 (MQ=255)                                                                                                                                                                             aCCGACACCCTCGACGAAGTCGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACcgtcg                                                                                                                                     <  1:435986/160‑1 (MQ=25)                                                                                                                                                                                 acacCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGcc                                                                                         >  1:1089583/1‑200 (MQ=40)                                                                                                                                                                                        cgacgaAGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGc                                                                                                                                                          <  1:435379/128‑1 (MQ=25)                                                                                                                                                                                                tcgtggCGAAGCTGACCGCGACCCCTTCGGTGACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCgg                                                                                     <  2:829017/187‑1 (MQ=37)                                                                                                                                                                                                  gtggCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGCGGCAGCCAACAGCaccacc                                                                                                              >  2:101229/1‑162 (MQ=37)                                                                                                                                                                                                    ggCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTg                                                                                                                                                                                                                                     <  2:365099/41‑1 (MQ=38)                                                                                                                                                                                                           cTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATcaa                                                                                                                                                                                    >  2:359412/1‑83 (MQ=40)                                                                                                                                                                                                           cTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATcaa                                                                                                                                                                                    <  1:359415/83‑1 (MQ=39)                                                                                                                                                                                                                  cgACCCCTTCGGTTACCGAAGGggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgcacccgtggcggccaccgccgagttgatgcccaggcggat                                                                                                         >  2:164717‑M1/1‑22 (MQ=255)                                                                                                                                                                                                                  cgACCCCTTCGGTTACCGAAGGggtcgcgggcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgcaccagtggcgtgcaccgccg                                                                                                                            >  1:782763‑M1/1‑22 (MQ=255)                                                                                                                                                                                                                        cTTCGGTCACCGAAGGggtggcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgaaccagtggcgtccaccgccgagttgatgcccaggctgatctggc                                                                                                    <  2:704453‑M1/150‑135 (MQ=255)                                                                                                                                                                                                                         ttCGTTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTc                                                                                                                                                                                              <  1:13135/59‑1 (MQ=255)                                                                                                                                                                                                                           cGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCAc                                                                  <  1:860909/181‑1 (MQ=37)                                                                                                                                                                                                                           cGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCAc                                                                  >  2:860906/1‑181 (MQ=37)                                                                                                                                                                                                                            ggataccgaAGGggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgcaccagtggcgtccaccgccgagttgatgcccaggctgatctggccagcatcgttgtagacgtcatcgccctgcgca                                                                    <  2:548577‑M1/174‑167 (MQ=255)                                                                                                                                                                                                                             gTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGTCAGCCAACAGCACCACCGGTTc                                                                                                         >  2:906636/1‑140 (MQ=17)                                                                                                                                                                                                                                aCCGAAGGggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgccatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgcaccagtggcgtccaccgccgagttgatgcccaggctgatctggccagcatcgttgtagacgtcatcgccctgcgcagcgtgggtgtacggcgcgctggtttcgccggccttgatggtgacctgggcgttgttgctcag      <  1:748744‑M1/236‑229 (MQ=255)                                                                                                                                                                                                                                aCCGAAGGggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgcaccagtggcgtccaccgccgagttgatgcccaggctgatctggccagcatcgttgtagacgtcatcgccctgcgcagcgtgggtgtacggcgcgctggtttcgccggccttgatggtgacctgggcgttgttgctcag      <  1:557116‑M1/236‑229 (MQ=255)                                                                                                                                                                                                                                 ccGAAGGggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcgccaccgcccagctcgaggttctcgaaggtcgcaccagtggcgtccaccgccgagttgatgcccaggctgatctggccagcatcgttgtagacgtcatcgccctgcgcagcgtgggtgtacggcgcgctggtttcgccggccttgatggtgacctgggcg                 <  1:593267‑M1/224‑218 (MQ=255)                                                                                                                                                                                                                                   gacggggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagcgcgaggttctcgaaggtcgcaccagtggcgtccaccgccgagttgatgcccaggctgatctggccagcatcgttgtagacgtcatcgctctgcgcagcgtgggtgtacggcgcgctggtttcgccggccttgatggg                           <  1:756167‑M1/209‑208 (MQ=255)                                                                                                                                                                                                                                   gAAGGggtcgcggtcagcttggccaccacttcgtcggtggtgtcggtgacatccaccttcgcggcaccgcccagctcgaggttctcgaaggtcgcaccagtggcgtccaccgccgagttgatgcccaggctgatctggccagcatcgttgtagacgtcatcgccctgcgcagcgtgggtgtacggcgcgctggtttcgccggccttgatggtgacctgggcgttgttgctcaggg    >  1:645069‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                                     aGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAAc  >  1:628785/1‑235 (MQ=34)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                         TCAGGTCACCATCAAGGCCGGTGAGACCAGTGCGCCGTACACCCACGACGCGCAAGGCGATGACGTCTACCAGGACGCTGGCCAGATCAGCCTGGGCATCACGTCCGCTGTGGATGTAGACGGTCACACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCCTCGACGAGGTGGTGGCGAAGCTGACCGCGACCCCTTCGGTCACCGAAGGCGGTGAGATCACCTACACCATCACCCTGACCAACAAAGACGGTCTGCCGATCAACAACCACTCGGAGCTGTACTTCAAGCTGACCGACGGCACCACCGTCGTCGTGGCAGCCAACAGCACCACCGGTTCGGCCACTGCAACCGCCCCGGACAACGTCTATGTCGGCACCAACGCGCCGGTGGTCAATGCCATCGACGCCGTCAGCGGCGCAGATGCGTGGAAGTTCGAAAAC  >  AE015451/202087‑202549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.