| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | AE015451 | 1,531,732 | Δ107 bp | 23.3% | coding (38‑144/630 nt) | PP_1344 ← | conserved protein of unknown function |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 1531731 | 8 (0.140) | 8 (0.140) | 7/328 | NT | 23.3% | coding (145/630 nt) | PP_1344 | conserved protein of unknown function |
| ? | AE015451 | 1531839 = | 45 (0.810) | coding (37/630 nt) | PP_1344 | conserved protein of unknown function | |||||
ACAAAGTACCATCGCGCCAGGACGCCACATGGCAGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTA > AE015451/1531521‑1531940 | acaaAGTACCATCGCGCCAGGACGCCACATGGCAGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGcc < 1:955058/235‑1 (MQ=255) tGGCAGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttga < 2:366209‑M1/234‑53 (MQ=255) cAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTAt < 2:1082749/228‑1 (MQ=255) gcAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatg < 1:358775‑M1/160‑67 (MQ=255) gcAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatg > 2:358772‑M1/1‑94 (MQ=255) gcAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCttt > 1:183670/1‑235 (MQ=255) atccTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAg < 1:275017/138‑1 (MQ=255) cgggggggAGGGTGGCGGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCgg < 1:162192/151‑1 (MQ=255) gCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatg < 1:117441‑M1/134‑67 (MQ=255) gCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatg > 2:117439‑M1/1‑68 (MQ=255) ggAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCctctgc > 2:162190/1‑97 (MQ=255) agggtgGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTGCGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccggg < 2:211335‑M1/209‑148 (MQ=255) gggggTACGCGTGAAGTGACGTGGGCACAGTCTAACa > 1:645254/1‑37 (MQ=255) gTACGCGTGAAGTGACGTGGGCACAGgcagccaaagacaagactggttctcgagagctttcatgttgccaagccttgaactcagtgaaaatgccactatctaaaacaggcccctgccaaaacgctgtagcagcatcgtggaaatccaccactttcctcaccatcgtatccgggtagaatgctcgttcg > 2:126063‑M1/1‑26 (MQ=255) gcgTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAAc > 1:1050735/1‑183 (MQ=255) aaGTGACGTGGGCACAGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccgggtacaatgctcgttcgcatgcggcctatgggctgcacgggcgactcatggggccgccctccat < 2:947285‑M1/226‑210 (MQ=255) caGgcagccaaagacaagactggttctcgatagctttcatgttgccaagccttgaactcagtgaaaatgcccctatctaaaacaggcccctgccaaaacgctgtatcagcatcgtggaaatccaccactttcctcaccatcgtttccgggtagaatgctcgttcgcatgcggcct < 2:843612‑M1/175‑173 (MQ=255) | ACAAAGTACCATCGCGCCAGGACGCCACATGGCAGTGCTCGCGGGCAGCCGGTTGCAACTGGCTTTCCAGCAGGCGCTGCAAGTGCTCCAGGCGCTCGGCCTGGTTCAGCAGCAGGCGCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTA > AE015451/1531521‑1531940 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |