Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC	AE015451	1,531,732	Δ107 bp	23.3%	coding (38‑144/630 nt)	PP_1344 ←	conserved protein of unknown function

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1531731	8 (0.140)	8 (0.140)	7/328	NT	23.3%	coding (145/630 nt)	PP_1344	conserved protein of unknown function
	?	AE015451	1531839 =	45 (0.810)					coding (37/630 nt)	PP_1344	conserved protein of unknown function

GCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGCCCTCCATC  >  AE015451/1531638‑1532048                                                                                                                                                                                                            |                                                                                                                                                                                                                  gcAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCttt                                                                                                                                                                                  >  1:183670/1‑235 (MQ=255)                      tggcagtgctcgcgggcagccggttgcaactggctttccagcaggcgctgcaagtgctccaggcgctcggcctggttcagcagcaggcgcagcgggcgcacctggcgcagcagggcggaaggtggctgggcgggggagggtttgtaggccatgggggtacgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGa                                                                                                                                                                <  2:366209‑M2/52‑1 (MQ=255)                                                                         gcgTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAAc                                                                                                                                                              >  1:1050735/1‑183 (MQ=255)                                                                                                  aaCATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACCCTGTATCAGCATCGTGGAAAt                                                                                              >  1:1061440/1‑222 (MQ=255)                                                                                                       tttggctGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCaa                                                                                                          >  1:111774/7‑204 (MQ=255)                                                                                                          cGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGaa                                                                                                <  2:183668/212‑1 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGTGAACCCGCTCCTACAA‑‑GATACCGATAACCCTGGCAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTg                                                                                                                >  2:655404/1‑194 (MQ=18)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGtt                                                                                                                                                                                              >  1:396989/1‑116 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGtt                                                                                                                                                                            <  1:533871/134‑1 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGtt                                                                                                                                                                            >  2:533868/1‑134 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTg                                                                                                                >  2:445178/1‑194 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCCGCATCGTGGACATCCACCACTTTCCTCACCATCGttt                                                                      >  1:67475/1‑236 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGttt                                                                      >  1:265348/1‑236 (MQ=255)                                                                                                            ttGCCTGTGCCGGCCTCTTCGCCGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTAt                                                                                                                                           >  2:463382/1‑167 (MQ=255)                                                                                                             tGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGc                                                                                                                                <  2:735414/177‑1 (MQ=255)                                                                                                              gcagcgggcgcacctggcgcagcagggcggaaggtggctgggcgggggagggtttgtaggccatgggggtacgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATg                                                                                                                                                  <  1:358775‑M2/66‑1 (MQ=255)                                                                                                              gcagcgggcgcacctggcgcagcagggcggaaggtggctgggcgggggagggtttgtaggccatgggggtacgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATg                                                                                                                                                  >  2:358772‑M2/95‑160 (MQ=255)                                                                                                                    gCCGGCCTCTTCGCGTGGGATCCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATg                                                                                                                                                  <  1:598369/152‑1 (MQ=255)                                                                                                                     ccGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTa                                                               >  2:846167/1‑234 (MQ=255)                                                                                                                      cGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGt                                                                                                               >  2:613174/1‑185 (MQ=255)                                                                                                                      cGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGaa                                                            <  1:846170/236‑1 (MQ=255)                                                                                                                            ctTCGCGGGTGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCAt                                                                                                                                                                               >  1:687218/1‑115 (MQ=255)                                                                                                                            ctTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGc                                                                                                                  >  2:1080014/1‑176 (MQ=255)                                                                                                                                        gcggaaggtggctgggcgggggagggtttgtaggccatgggggtacgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATg                                                                                                                                                  >  2:117439‑M2/69‑134 (MQ=255)                                                                                                                                        gcggaaggtggctgggcgggggagggtttgtaggccatgggggtacgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATg                                                                                                                                                  <  1:117441‑M2/66‑1 (MQ=255)                                                                                                                                          ccGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCCTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGCAAGCTCGTTCGCATGCg                                            >  2:259692/1‑232 (MQ=255)                                                                                                                                          ccGCTCCTGCCAGGGTTATCGGGA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAaagaca                                                                                                                                                                                                       >  2:354634/1‑77 (MQ=255)                                                                                                                                            agggtggctgggcgggggagggtttgtaggccatgggggtgcgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCggg                                                                 <  2:211335‑M2/147‑1 (MQ=255)                                                                                                                                                 tGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGtt                                                    >  2:1037878/1‑217 (MQ=255)                                                                                                                                                 tGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGc                                                 <  1:862298/220‑1 (MQ=255)                                                                                                                                                 tGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGc                                                 >  2:862295/1‑220 (MQ=255)                                                                                                                                                 tGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGTCCTATggg                                   >  2:784597/1‑234 (MQ=255)                                                                                                                                                     aGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGTCCTATGGGCTGCAc                             <  1:784600/236‑1 (MQ=255)                                                                                                                                                             cGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACt                     >  1:451654/1‑236 (MQ=255)                                                                                                                                                                  tctgttGTAGGCGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGCCAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCa                                                                                                                        <  2:443585/130‑1 (MQ=255)                                                                                                                                                                      ttGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGGTCGCATGCGGCCTATGCGCTGCACGGGCGACTCATggg               >  1:783315/1‑235 (MQ=255)                                                                                                                                                                        gTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGgc             >  1:624584/1‑235 (MQ=255)                                                                                                                                                                           ggAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATgggg              <  2:680841/231‑1 (MQ=255)                                                                                                                                                                           ggAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATgggg              >  1:680844/1‑231 (MQ=255)                                                                                                                                                                            acgCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGtt                                                                                                                                                                            <  2:517241/70‑1 (MQ=255)                                                                                                                                                                               cGGGTTCACCCGCGGAGAGGCCGGCACAGGCAGGCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCAc                             >  2:1026957/1‑212 (MQ=255)                                                                                                                                                                               cGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGCCCTc      >  1:906378/1‑235 (MQ=255)                                                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGc                                                         >  2:979380/1‑182 (MQ=255)                                                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCAc                             >  2:40805/1‑210 (MQ=255)                                                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCAc                             <  1:40806/210‑1 (MQ=255)                                                                                                                                                                                 ggTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGCCCTCCAt   >  1:647533/1‑236 (MQ=255)                                                                                                                                                                                  gtacgcgtgaagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGAGAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCACTATCTAAAACAGGCCCCTGCCAAAACGCTGTAGCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTATCCGGGTAGAATGCTCGTTCg                                                  >  2:126063‑M2/27‑188 (MQ=255)                                                                                                                                                                                  gTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACgg                           >  2:593582/1‑211 (MQ=255)                                                                                                                                                                                  gTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACgg                           <  1:593585/211‑1 (MQ=255)                                                                                                                                                                                  gTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGCCCTCCATc  <  1:445181/236‑1 (MQ=255)                                                                                                                                                                                     cACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGccc        <  2:940401/227‑1 (MQ=255)                                                                                                                                                                                     cACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGccc        >  1:940404/1‑227 (MQ=255)                                                                                                                                                                                           aagtgacgtgggcacagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTACAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGCCCTCCAt   <  2:947285‑M2/209‑1 (MQ=255)                                                                                                                                                                                                agGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCaa                                                                                                                       >  2:177981/1‑105 (MQ=255)                                                                                                                                                                                                         cagGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCt                                        <  2:843612‑M2/172‑1 (MQ=255)                                                                                                                                                                                                            |                                                                                                                                                                                                                  GCAGCGGGCGCACCTGGCGCAGCAGGGCGGAAGGTGGCTGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTA‑‑TCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTTTCCTCACCATCGTTTCCGGGTAGAATGCTCGTTCGCATGCGGCCTATGGGCTGCACGGGCGACTCATGGGGCCGCCCTCCATC  >  AE015451/1531638‑1532048

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.