New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 240534744 (0.760)3 (0.050) 3/324 NT 6.6% coding (344/432 nt) PP_2108 conserved protein of unknown function
?AE015451 = 2405351 43 (0.790)coding (348/432 nt) PP_2108 conserved protein of unknown function

GTGTGGTGCGCTGGAACAGGTACGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAGCAACTCAAGTACAGCGTCAACCGCATGCCCGTGGATCGGGTGGCTGACGCCGTTCTGGAACT  >  AE015451/2405117‑2405577
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                      
gtgtgGTGCGCTGGAACAGGTACGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTg                                                                                                                                                                                                                                    >  1:507325/1‑235 (MQ=255)
     gtgCGCTGGAACAGGTACGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGcatct                                                                                                                                                                                                                               <  1:578354‑M2/235‑6 (MQ=255)
           tGGAACAGGTACGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGt                                                                                                                                                                                                                         >  1:130903/1‑235 (MQ=255)
                cAGGTACGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCGGGAATTCGACAGATGGGTGCATCTGTCGGTGAc                                                                                                                                                                                                                      >  2:1071272/1‑233 (MQ=255)
                     aCGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGc                                                                                                                                                                                                               >  1:63106/1‑235 (MQ=255)
                           gttgttTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCAcgccgc                                                                                                                                                                                                        >  1:303610/1‑236 (MQ=255)
                              gttTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCgcgc                                                                                                                                                                                                      <  2:507322/235‑1 (MQ=255)
                              gttTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgca                                                                                                                                                                                                     <  1:886203/236‑1 (MQ=255)
                              gttTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgca                                                                                                                                                                                                     <  1:581760/236‑1 (MQ=255)
                               tttGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgca                                                                                                                                                                                                     <  1:102643/235‑1 (MQ=255)
                                       ggccATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGAGCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCgggctgacct                                                                                                                                                                                                        <  1:388066/222‑9 (MQ=255)
                                           atcatcatcAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt                                                                                                                                                                                                                                     <  1:163396/191‑1 (MQ=255)
                                              atcatcaGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt                                                                                                                                                                                                                                     <  2:119915/188‑1 (MQ=255)
                                                            gTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCg                                                                                                                                                                       >  1:841795/1‑236 (MQ=255)
                                                              aTCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGGGCt                                                                                                                                                                                           >  1:257502/1‑214 (MQ=255)
                                                                              cAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTg                                                                                                                                                      >  1:364618/1‑235 (MQ=255)
                                                                                aTCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCa                                                                                                                                                    >  1:714978/1‑235 (MQ=255)
                                                                                   ggTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACGTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCAcgcc                                                                                                                                                                                                          <  2:163125/178‑1 (MQ=255)
                                                                                           ggTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTg                                                                                                                                                                                                                                    <  2:415016/144‑1 (MQ=255)
                                                                                             tGGCGCCTCCGATAGCCAGCACATGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTTCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGcacccatctgtcgaa                                                                                                                                                                                                                         <  2:574830‑M1/153‑16 (MQ=255)
                                                                                              tgcgcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGa                                                                                                                                      <  2:1004089/234‑1 (MQ=255)
                                                                                               gcgcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTg                                                                                                                                       <  2:672707/233‑1 (MQ=255)
                                                                                                  ccTACGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt                                                                                                                                                                                                                                     <  2:217308/136‑1 (MQ=255)
                                                                                                      cGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGcatctgtcg                                                                                                                                                                                                                           >  2:179961‑M2/1‑133 (MQ=255)
                                                                                                            ccAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGcatctg                                                                                                                                                                                                                              >  2:779126‑M2/1‑127 (MQ=255)
                                                                                                             cAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt                                                                                                                                                                                                                                     <  2:659038/125‑1 (MQ=255)
                                                                                                                 aCGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGGGCATCTGTCGGTGACGCGCGGCACGCCGCgca                                                                                                                                                                                                     >  1:322881/1‑153 (MQ=255)
                                                                                                                   gTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgca                                                                                                                                                                                                     >  1:411293/1‑151 (MQ=255)
                                                                                                                   gTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgca                                                                                                                                                                                                     <  2:411290/151‑1 (MQ=255)
                                                                                                                      cAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCt                                                                                                                                                                <  2:130901/185‑1 (MQ=255)
                                                                                                                             tGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGtata                                                                                                       >  1:1065810/1‑235 (MQ=255)
                                                                                                                                cggcggACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATg                                                                                                              <  2:905159/225‑1 (MQ=255)
                                                                                                                                  gcggACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGag                                                                                                                       >  1:712524/1‑213 (MQ=255)
                                                                                                                                  gcggACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATg                                                                                                              <  2:714975/223‑1 (MQ=255)
                                                                                                                                      aCTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATaa                                                                                                    <  2:447168/229‑1 (MQ=255)
                                                                                                                                        ttCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAgtgt                                                                                           >  1:758480/1‑236 (MQ=255)
                                                                                                                                                   cGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAgcgc                                                                                                                                           >  1:48717/1‑177 (MQ=255)
                                                                                                                                                           gCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCcaa                                                                                                                                                                              <  2:981313/134‑1 (MQ=255)
                                                                                                                                                            cccGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGcatctgtcgaattccaggatcagctgatcgaa                                                                                                                                                                                                    >  2:282332‑M2/1‑79 (MQ=255)
                                                                                                                                                              cgcgcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGc                                                                                                             >  2:1019492/1‑196 (MQ=255)
                                                                                                                                                               gcgcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGtt                                                                                                                    <  2:1065807/188‑1 (MQ=255)
                                                                                                                                                               gcgcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGc                                                                                >  2:1036058/1‑224 (MQ=255)
                                                                                                                                                                  cgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAgg                                                                                                                           <  1:296710/178‑1 (MQ=255)
                                                                                                                                                                  cgAGACCGGCAGGCGAAGCAGCAAAAGGGCGGGGCCCTTCGATCCGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATg                                                                                                              <  2:137869/191‑1 (MQ=255)
                                                                                                                                                                   gagaCCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGACTTCGACAGATGcacccatctggcgaattccaggatcagctgatcgaaggacaccgccctctaggcgattcgccgg                                                                                                                                                                        >  2:552244‑M1/1‑68 (MQ=255)
                                                                                                                                                                    agaCCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATg                                                                                                              <  2:205886/189‑1 (MQ=255)
                                                                                                                                                                        cGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGt                                                                    >  2:959778/1‑227 (MQ=255)
                                                                                                                                                                           ccGGCGAATCGCCTAGAGGGCGGTGTCCTTCGATCAGCTGATCCTGGAATTCGCCAGATGGGTGcatctgtcgaagtccaggatcagctgatcgaagggcaccgcacttttgctgattcgccggacggtctc                                                                                                                                                                >  2:552244‑M2/1‑64 (MQ=255)
                                                                                                                                                                               cGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCt                                                                                                            <  2:975458/180‑1 (MQ=255)
                                                                                                                                                                                                       ttCGATCAGCTGATCCTGGAATTCGACAGATGcacccatctgtcgaattccaggatcagctgatcgaagggcaccgcacttttgctgattcgccggacggtctcgcgcggg                                                                                                                                                         >  2:282332‑M1/1‑32 (MQ=255)
                                                                                                                                                                                                                 tGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGtt                                                                                                                    >  1:761945/1‑138 (MQ=255)
                                                                                                                                                                                                                 tGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGtt                                                                                                                    <  2:761942/138‑1 (MQ=255)
                                                                                                                                                                                                                      cTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAgc                                                                                                                                             <  2:128753/108‑1 (MQ=255)
                                                                                                                                                                                                                      cTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAgc                                                                                                                                             >  1:128755/1‑108 (MQ=255)
                                                                                                                                                                                                                      cTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAGCAACTCAAGTACAGCGTCAAcc                                          <  1:886411/207‑1 (MQ=255)
                                                                                                                                                                                                                      cTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAGCAACTCAAGTACAGCGTCAAcc                                          >  2:886408/1‑207 (MQ=255)
                                                                                                                                                                                                                      cTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAGCAACTCAAGTACAGCGTCAACCGCATGCCCGTGGATCGGGTGGCTGACGcc             >  1:298059/1‑236 (MQ=255)
                                                                                                                                                                                                                       gtgAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAGCAACTCAAGTa                                                     <  1:301152/193‑1 (MQ=255)
                                                                                                                                                                                                                            ttCGACAGATGGGTGcatctgtcgaattccaggatcagctgatcgaagggcaccgaacttttgctgattcgccggacggtctcgcgcgggctgacctcgatcaccgtgaagtccgccgccagcccttgcatgtgctggctatcggaggcgcca                                                                                          <  2:574830‑M2/153‑139 (MQ=255)
                                                                                                                                                                                                                              cGACAGATGcacccatctgtcgaattccaggatcagctgatcgaagggcaccgcacttttgctgattcgccggacggtctcgcgcgggctgacctcgatcaccgtgaagtccgccgccagcccttgcacgtgctggctatcg                                                                                                   >  2:179961‑M1/1‑9 (MQ=255)
                                                                                                                                                                                                                                 cAGATGcacccatctgtcgaattccaggatcagctgatcgaagggcaccgcacttttgctgattcgccggacggtctcgcgcgggctgacctcgatcaccgtgaagtccgccgccagcccttgcacgtgctgg                                                                                                         >  2:779126‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                  aGATGcacccatctgtcgaattccaggatcagctgatcgaagggcaccgcacttttgctgattcgccggacggtctcgcgcgggctgacctcgatcaccgtgaagtccgccgccagcccttgcacgtgctggctatcggaggcgccaccgatcaaccgattgaccctttcgctgcgatacccgctgctgatgatgatgggcgcgtcaaacaacgcacgtacctgttccagcgcac  <  1:578354‑M1/235‑231 (MQ=255)
                                                                                                                                                                                                                                    aTGGGTGCATCTGTCGGTGACGCGCGGGACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAg                                                                <  2:687524/171‑1 (MQ=255)
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                      
GTGTGGTGCGCTGGAACAGGTACGTGCGTTGTTTGACGCGCCCATCATCATCAGCAGCGGGTATCGCAGCGAAAGGGTCAATCGGTTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAGCCATGCTCAATGTCGAGCAACTCAAGTACAGCGTCAACCGCATGCCCGTGGATCGGGTGGCTGACGCCGTTCTGGAACT  >  AE015451/2405117‑2405577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.