New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 308259257 (0.990)3 (0.050) 3/326 NT 5.2% coding (1476/1551 nt) PP_2692 putative Transporter, BCCT family
?AE015451 = 3082723 54 (0.980)coding (1345/1551 nt) PP_2692 putative Transporter, BCCT family

TTGCATCATCCGCCGCATGCTGCTGCGCACGAAGCTTAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCT  >  AE015451/3082362‑3082826
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          
ttGCATCATCCGCCGCATGCTGCTGCGCACGAAGCTTAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCg                                                                                                                                                                                                                                        <  1:925724/235‑1 (MQ=255)
 tGCATCATCCGCCGCATGCTGCTGCGCACGAAGCTTAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCATCAGCGACACCGGc                                                                                                                                                                                                                                      <  1:564669/235‑1 (MQ=255)
           gccgcATGCTGCTGCGCACGAAGCTTAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGtg                                                                                                                                                                                                                             >  1:695714/1‑235 (MQ=255)
                                 gCTTAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCa                                                                                                                                                                                                          <  2:1057947/232‑1 (MQ=255)
                                    tAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGAt                                                                                                                                                                                                              <  2:603317/225‑1 (MQ=255)
                                     aGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATg                                                                                                                                                                                                                    <  1:975929/218‑1 (MQ=255)
                                      gCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTc                                                                                                                                                                                                  <  1:839036/235‑1 (MQ=255)
                                              tGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGcc                                                                                                                                                                                          >  1:442469/1‑235 (MQ=255)
                                               ggAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGc                                                                                                                                                                                           >  2:902507/1‑233 (MQ=255)
                                                 aaGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGGGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGt                                                                                                                                                                                                                              >  1:352659/1‑196 (MQ=255)
                                                         aCCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGt                                                                                                                                                                                                   >  2:465470/1‑215 (MQ=255)
                                                          cccAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGt                                                                                                                                                                              <  1:1018722/235‑1 (MQ=255)
                                                             aGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATg                                                                                                                                                                                                                    <  1:979668/194‑1 (MQ=255)
                                                               ccGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCa                                                                                                                                                                         <  1:147228/235‑1 (MQ=255)
                                                               ccGGGCCAGGTCCATGACTGGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTg                                                                                                                                                                                        <  1:220791/220‑1 (MQ=255)
                                                                   gCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCa                                                                                                                                                                                                                                     <  2:1055679/171‑1 (MQ=255)
                                                                             tGACTTGGCTGGCAGGGCGCAACGGGGGTAGTGCAGGCACGCTGTTGGGCATTGTTGTTGGACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCAGGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGtga                                                                                                                                                                                                                            <  2:60999/170‑1 (MQ=255)
                                                                                 ttGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTg                                                                                                                                                                                        <  1:469259/202‑1 (MQ=255)
                                                                                 ttGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATg                                                                                                                                                                                <  1:91402/210‑1 (MQ=255)
                                                                                 ttGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGAGCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAg                                                                                                                                                         <  1:1057777/233‑1 (MQ=255)
                                                                                               gcAACGCGGGTATTGCATGCACGCTGTTTGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGtgatga                                                                                                                                                                                                                         <  2:420753/155‑1 (MQ=255)
                                                                                                    gcgGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTg                                                                                                                                                                                                            <  2:103427/163‑1 (MQ=255)
                                                                                                       ggTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACAcc                                                                                                                                                                                             <  1:421688/175‑1 (MQ=255)
                                                                                                        gTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACcgc                                                                                                                               <  1:1090418/236‑1 (MQ=255)
                                                                                                          aTTGCAGGCACGCTGTTGGGCATTGTTGTTGGACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGTCACCGGCACCGCGGTGATGACaa                                                                                                                                                                                                                      <  2:826685/147‑1 (MQ=255)
                                                                                                           ttGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCCCCAGGc                                                                                                                                                       >  2:429890/1‑209 (MQ=255)
                                                                                                               aGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCacac                                                                                                                                                                                              <  1:971693/166‑1 (MQ=255)
                                                                                                                     gCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGACTGCGCCAATGGAGATCAGCAACACCGCCGCCAGGCCCACGCCg                                                                                                                                               >  2:183618/1‑207 (MQ=255)
                                                                                                                      gtgtggGGCAGTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTGGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACgataaaccgaagaagtggttgcgcggtttc                                                                                                                                                                                                              <  2:64545‑M1/142‑31 (MQ=255)
                                                                                                                      cTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGcacc                                                                                                                                                                    <  2:887535/185‑1 (MQ=255)
                                                                                                                      cTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAAcc                                                                                                                                 >  1:504472/1‑220 (MQ=255)
                                                                                                                          tGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGtt                                                                                                             <  1:465473/236‑1 (MQ=255)
                                                                                                                                      ttgtACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTCTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGaa                                                                                                                                                                                                                  >  2:437894/1‑123 (MQ=255)
                                                                                                                                       tgtACCTGGATGGGTCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTc                                                                                                                                                                                                  <  2:309276/138‑1 (MQ=255)
                                                                                                                                          aCCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCAGCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGcacc                                                                                                                                                                    <  1:879791/165‑1 (MQ=255)
                                                                                                                                              ggatggatCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCa                                                                                                                        >  1:666571/1‑205 (MQ=255)
                                                                                                                                                atggatCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCg                                                                                                        <  1:1085041‑M2/219‑2 (MQ=255)
                                                                                                                                                atggatCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAg                                                                                       >  1:909019/1‑236 (MQ=255)
                                                                                                                                                 tggatCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAgc                                                                                      >  1:474854/1‑236 (MQ=255)
                                                                                                                                                  ggatCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCCTCGGTTTATCGTCGCTGGACATCGCCAgcg                                                                                     >  1:1082697/1‑236 (MQ=255)
                                                                                                                                                      cATGTTCAGACGCCTTGTTCACGGGCCATGAGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGccc                                                                                                                                                     >  2:342743/1‑168 (MQ=255)
                                                                                                                                                       aTGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACa                                                                                              >  2:890623/1‑222 (MQ=255)
                                                                                                                                                            cAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCgtcgc                                                                                                    <  2:827397‑M2/211‑6 (MQ=255)
                                                                                                                                                                  ccTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGtt                                                                                                             <  1:545120/196‑1 (MQ=255)
                                                                                                                                                                  ccTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGtt                                                                                                             >  2:545117/1‑196 (MQ=255)
                                                                                                                                                                      gTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACgataaaccgaagaagtggttg                                                                                                                                                                                                                       <  2:981809‑M1/86‑22 (MQ=255)
                                                                                                                                                                      gTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACgataaaccgaagaagtggttg                                                                                                                                                                                                                       >  1:981812‑M1/1‑65 (MQ=255)
                                                                                                                                                                       ttCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCgtcgctg                                                                                                  <  1:184121‑M2/202‑8 (MQ=255)
                                                                                                                                                                         cACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATgg                                                                   <  2:909016/231‑1 (MQ=255)
                                                                                                                                                                            gggCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAgcg                                                                                     <  1:835868/210‑1 (MQ=255)
                                                                                                                                                                               cgaTGTCTAGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCTACACCGGCACCGCGCTGATGACAATg                                                                                                                                                                                                                    <  2:211939/78‑1 (MQ=255)
                                                                                                                                                                               ccATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGt                                                                >  2:739082/1‑228 (MQ=255)
                                                                                                                                                                                cATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATtg                                                        >  1:140144/1‑235 (MQ=255)
                                                                                                                                                                                    tgtCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCActtctt                                                                                                                  >  2:376116/1‑173 (MQ=255)
                                                                                                                                                                                           cGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACcgc                                                                                                                               >  2:877674/1‑153 (MQ=255)
                                                                                                                                                                                           cGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTg                                              >  2:1012823/1‑234 (MQ=255)
                                                                                                                                                                                            gATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACa                                                                                                                                                                                                                       >  2:116925/1‑64 (MQ=255)
                                                                                                                                                                                                     ggCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACtt                                   <  1:9248/235‑1 (MQ=255)
                                                                                                                                                                                                        aTCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGGGATGACAATGAAGGATTGCAGGGCCGTCACACCACCTg                                                                                                                                                                                        >  2:713329/1‑83 (MQ=255)
                                                                                                                                                                                                         tCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACtt                                   <  2:442466/231‑1 (MQ=255)
                                                                                                                                                                                                                    tGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACCATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCgtc                                                                                                      <  1:794297‑M2/153‑4 (MQ=255)
                                                                                                                                                                                                                    tGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAgc                    >  1:52657/1‑235 (MQ=255)
                                                                                                                                                                                                                           agcACCAGCGACACCGGCACCGCGGTCATGACAATGAAGGATTGCAGGGCCGTCCCACCGCCTGCGCCAATCGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCCACCCCCTCTTCGGtt                                                                                                             <  2:866470/137‑1 (MQ=255)
                                                                                                                                                                                                                              aCCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTgaga                                           >  1:398371/1‑202 (MQ=255)
                                                                                                                                                                                                                                cAGCGACgataaaccgaagaagtggttgcgcggtttctgggcaatcggcatgggcctggcggcggtggtgctgatcaccattggcgcaggcggtgtgacggccctgcaatccttcattgtcatcaccgcggtgccggtgtcgctggtgatcctgccagccctgtgggatgccgtgcgcatcgctcgacacatggcccgtgaa                                         <  1:184121‑M1/202‑196 (MQ=255)
                                                                                                                                                                                                                                cAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGc       <  1:890626/236‑1 (MQ=255)
                                                                                                                                                                                                                                  gCGACgataaaccgaagaagtggttgcgcggtttctgggcaatcggcatgggcctggcggcggtggtgctgatcaccattggcgcaggcggtgtgacggccctgcaatccttcattgtcatcaccgcggtgccggtgtcgctggtgatcctgccagccctgtgggatgccgtgcgcatcgctcgacacatggcccgtgaacaaggcgtctg                              <  2:827397‑M1/211‑207 (MQ=255)
                                                                                                                                                                                                                                  gCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCg                                                              >  1:458410/1‑179 (MQ=255)
                                                                                                                                                                                                                                   cGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAAc                                     <  2:480095/203‑1 (MQ=255)
                                                                                                                                                                                                                                    gacgataaaccgaagaagtggttgcgcggtttctgggcaatcggcatgggcctggcggcggtggtgctgatcaccattggcgcaggcggtgtgacggccctgcaatccttcatggtcatcaccgcggtgccggtgtcgctggtgatcctgcca                                                                                      <  1:794297‑M1/153‑151 (MQ=255)
                                                                                                                                                                                                                                    gACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTg                                                                                                                                                                                        <  2:272799/55‑1 (MQ=255)
                                                                                                                                                                                                                                      cgataaaccgaagaagtggttgcgcggtttctgggcaatcggcatgggcctggcggcggtggtgctgatcaccattggcgcaggcggtgtgacggccctgcaatccttcattgtcatcaccgcggtgccggtgtcgctggtgatcctgccagccctgtgggatgccgtgcgcatcgctcgacacatggcccgtgaacaaggcgtctgaacatgatccat                  <  1:1085041‑M1/219‑219 (MQ=255)
                                                                                                                                                                                                                                      cacCGGCACCGCGGTGATGACAACGAAGCATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCt  <  1:1031549/235‑1 (MQ=255)
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                          
TTGCATCATCCGCCGCATGCTGCTGCGCACGAAGCTTAGCGGGCTCTGGAAGTGGCTACCCAGCCGGGCCAGGTCCATGACTTGGCTGGCAGGGCGCAACGCGGGTATTGCAGGCACGCTGTTGGGCATTGTTGTTGTACCTGGATGGATCATGTTCAGACGCCTTGTTCACGGGCCATGTGTCGAGCGATGCGCACGGCATCCCACAGGGCTGGCAGGATCACCAGCGACACCGGCACCGCGGTGATGACAATGAAGGATTGCAGGGCCGTCACACCGCCTGCGCCAATGGTGATCAGCACCACCGCCGCCAGGCCCATGCCGATTGCCCAGAAACCGCGCAACCACTTCTTCGGTTTATCGTCGCTGGACATCGCCAGCGCCACGGTGAAGGCCATGGCGTCGCCATTGGTGGCCACTGAGATGAAACTTAGGAACAGGAACAGCGCGCTGACAAGGCCACCT  >  AE015451/3082362‑3082826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.