New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3914680 =	49 (0.850)	3 (0.050)	3/324	NT	6.3%	coding (107/702 nt)	PP_3454	putative transcriptional regulatory protein
	?	AE015451	3914699 =	43 (0.790)					coding (88/702 nt)	PP_3454	putative transcriptional regulatory protein

GCACGCGTGGCTCACAGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAA  >  AE015451/3914462‑3914915                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            gcaCGCGTGGCTCACAGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGAt                                                                                                                                                                                                                             >  1:283744/1‑235 (MQ=255)    cgcgTGGCTCACAGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGAt                                                                                                                                                                                                                             <  2:1048723/232‑1 (MQ=255)       gTGGCTCACAGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTg                                                                                                                                                                                                                       >  1:446229/1‑235 (MQ=255)          gCTCACAGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCgg                                                                                                                                                                                                                                  <  2:451355/221‑1 (MQ=255)               caGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGaa                                                                                                                                                                                                              >  1:1088514/1‑236 (MQ=255)                  ggTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTc                                                                                                                                                                                                           >  1:817466/1‑236 (MQ=255)                        gTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTcgttgcg                                                                                                                                                                                                     >  1:977896/1‑236 (MQ=255)                                 tcgtcgGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTa                                                                                                                                                                                            >  1:732439/1‑236 (MQ=255)                                   gtcgGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTa                                                                                                                                                                                            <  2:977893/234‑1 (MQ=255)                                     gcgggtgaacccgctcctacggggacctgcagcagcgggtttacccgcgaagcgctcgccacaggcttacttcaacccagacgcccaagcacctatgccgaacattttcctggtcgaagacgacagcgccctgtccgagctgatcgccagctacctgcaacgcaacgacttccatgtccaggTgag                                                                                                                                                                                                                                          <  2:1063547‑M1/4‑2 (MQ=255)                                        cccccATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTgg                                                                                                                                                                                       <  2:1018565/234‑1 (MQ=255)                                         ccccATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTgg                                                                                                                                                                                       <  2:372217/233‑1 (MQ=255)                                         ccccATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGc                                                                                                                                                                                      <  2:1088511/234‑1 (MQ=255)                                            aacccgctcctacggggacctgcagcagcgggtttacccgcgaagcgctcgccacaggcttacttcaacccagacgcccaagcacctatgccgaacattttcctggtcgaagacgaccgcgccctgtccgagctgatcgccagctacctgcaacgcaacgacttccatgtccaggt                                                                                                                                                                                                                                             <  2:72183‑M1/1‑1 (MQ=255)                                                          gCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGgc                                                                                                                                                                    >  1:1006112/1‑235 (MQ=255)                                                            aCCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTTCTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTc                                                                                                                                                                             <  1:577218/224‑1 (MQ=255)                                                            aCCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTc                                                                                                                                                                             >  2:577215/1‑224 (MQ=255)                                                            aCCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCt                                                                                                                                                                 >  1:884898/1‑236 (MQ=255)                                                              cTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTg                                                                                                                                                                >  1:540411/1‑235 (MQ=255)                                                                       gCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTgg                                                                                                                                                                                       <  2:71585/203‑1 (MQ=255)                                                                       gCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATc                                                                                                                                                                                  <  2:817463/208‑1 (MQ=255)                                                                                     gcGTCAGCATGAGGAGTGGCGGGGTCTGCGACGCCTGGCGCAGCAGCTGGCACAGCGGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGGCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGAt                                                                                                                                                                                                                             <  2:79291/150‑1 (MQ=255)                                                                                        tCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTgg                                                                                                                                                                                       <  2:1078835/186‑1 (MQ=255)                                                                                           gCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGGCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGc                                                                                                                                                                                                                                       >  2:650984/1‑135 (MQ=255)                                                                                                       gccgggTCTGCGACTCCTGCCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGAt                                                                                                                                                                                                                             <  2:287398/130‑1 (MQ=255)                                                                                                         aGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCgg                                                                                                                                                                                                                                  >  2:38546/1‑126 (MQ=255)                                                                                                                     tgcTGGCGCAGCAGGCGGCACAGCTGCAGGCCATCGATGCCCGGCGGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCtt                                                                                                                                                         <  2:106993/185‑1 (MQ=255)                                                                                                                      ccTGGCGAAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGT‑CAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCa                                                                                                                                    <  2:517884/206‑1 (MQ=255)                                                                                                                          gcgcAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGcc                                                                                                    >  1:72185/1‑235 (MQ=255)                                                                                                                                                       cGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAAcc                                                                          >  2:1022284/1‑232 (MQ=255)                                                                                                                                                        gaagacgacagcgccctgtccgagctgatcgccagctacctgcaacgcaacgacttccatgtccaggTGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCgct                                                                      <  1:384163‑M1/168‑1 (MQ=255)                                                                                                                                                         aTGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGCCCAGGCAAATGTTCGGCATAGGTGCTTGGGCGt                                                                                                                     >  2:30676/1‑187 (MQ=255)                                                                                                                                                           gCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCgctg                                                                     <  2:1006109/233‑1 (MQ=255)                                                                                                                                                              ccgcagcaTCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCCGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGaaa                                                                                                                                              <  2:118478/155‑1 (MQ=255)                                                                                                                                                                 cagcaTCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTc                                                            >  1:935336/1‑236 (MQ=255)                                                                                                                                                                     aTCAGGTCAAGGATGACCAGGTCAGGCCTGTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTg                                                                                                                  <  2:123246/178‑1 (MQ=255)                                                                                                                                                                      tCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTg                                                                                                                  <  2:711629/177‑1 (MQ=255)                                                                                                                                                                                gATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg                                               <  2:954453/234‑1 (MQ=255)                                                                                                                                                                                   gACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCgg                                               <  1:989922/231‑1 (MQ=255)                                                                                                                                                                                     ccAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCa                                          <  2:643768/234‑1 (MQ=255)                                                                                                                                                                                       ccagctacctgcaacgcaacgacttccatgtccaggTGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTgg                                                                                                                 <  2:957988‑M1/125‑1 (MQ=255)                                                                                                                                                                                       aGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTc                                                                                     >  2:224363/1‑189 (MQ=255)                                                                                                                                                                                       aGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCg                                                                        >  2:108837/1‑202 (MQ=255)                                                                                                                                                                                       aGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCAccc                                       >  2:499990/1‑235 (MQ=255)                                                                                                                                                                                       aGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCATCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCcg                                      >  1:1026581/1‑236 (MQ=255)                                                                                                                                                                                              cctgcaacgcaacgacttccatgtccaggTGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCcgcg                                    <  1:530634‑M1/202‑1 (MQ=255)                                                                                                                                                                                                cTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGa                                   >  1:959959/1‑230 (MQ=255)                                                                                                                                                                                                 tttGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGc                             >  1:339102/1‑235 (MQ=255)                                                                                                                                                                                                    gCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGt                                                                               <  1:236496/182‑1 (MQ=255)                                                                                                                                                                                                     ccGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAg                                                     <  2:910616/207‑1 (MQ=255)                                                                                                                                                                                                     ccGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGc                         <  1:663882/235‑1 (MQ=255)                                                                                                                                                                                                                 gTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTgg                                                                                                                                                                                       <  1:730017/65‑1 (MQ=255)                                                                                                                                                                                                                 gTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTgg                                                                                                                                                                                       >  2:730014/1‑65 (MQ=255)                                                                                                                                                                                                                    cAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCcgc                                     <  1:673854/208‑1 (MQ=255)                                                                                                                                                                                                                         caTGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAAcc                                                                          <  1:857062/166‑1 (MQ=255)                                                                                                                                                                                                                         caTGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAAcc                                                                          >  2:857059/1‑166 (MQ=255)                                                                                                                                                                                                                           TGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGaa  >  1:499993‑M1/1‑236 (MQ=255)                                                                                                                                                                                                                           |                                                                                                                                                                                                                                            GCACGCGTGGCTCACAGGGTTTGGTCACGTAGTCGTCGGCCCCCATTTCCAGGCCTAGCACCTGGTCATGGCTATCGTCGCGGGCCGTCAGCATGAGGATTGGCAGGGTCTGCGACTCCTGGCGCAGCAGCCGGCACAGCTGCAGGCCATCGATGCCCGGCAGCATCAGGTCAAGGATGACCAGGTCAGGCCTTTGCCGACGGTACTCGTCCAGCACATGATCGCCCCGGGCGATCACCTGGACATGGAAGTCGTTGCGTTGCAGGTAGCTGGCGATCAGCTCGGACAGGGCGCTGTCGTCTTCGACCAGGAAAATGTTCGGCATAGGTGCTTGGGCGTCTGGGTTGAAGTAAGCCTGTGGCGAGCGCTTCGCGGGTAAACCCGCTGCTGCAGGTCCCCGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGCACAGGCCCATGCAGAATATAGAA  >  AE015451/3914462‑3914915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.