New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4160438	41 (0.710)	3 (0.050)	3/326	NT	6.7%	coding (1178/1374 nt)	PP_3662	conserved protein of unknown function
	?	AE015451	= 4160588	44 (0.800)					coding (1328/1374 nt)	PP_3662	conserved protein of unknown function

CGAAATCATCATTGATGACCCGGCGGAAGTCGCCCGGCACATGGTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGACCCGCTGCTTTACTGAGGACGGGCATGGATGCCCGTC  >  AE015451/4160211‑4160671                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                          cGAAATCATCATTGATGACCCGGCGGAAGTCGCCCGGCACATGGTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTGTTc                                                                                                                                                                                                                                     >  2:957463/1‑234 (MQ=255)             tgatgaCCCGGCGGAAGTCGCCCGGCACATGGTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAg                                                                                                                                                                                                                       <  1:475951/236‑1 (MQ=255)                tgaCCCGGCGGAAGTCGCCCGGCACATGGTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAg                                                                                                                                                                                                                       <  2:1022828/233‑1 (MQ=255)                  aCCCGGCGGAAGTCGCCCGGCACATGGTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAAc                                                                                                                                                                                                                  <  1:495694/236‑1 (MQ=255)                                            gTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGa                                                                                                                                                                                         <  1:1019452/235‑1 (MQ=255)                                              cGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCCGCGCCGGGCGtt                                                                                                                                                                                                                                        >  2:516730/1‑186 (MQ=255)                                               gAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCg                                                                                                                                                                                                                                   <  1:849448/190‑1 (MQ=255)                                                    ccTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAATATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGa                                                                                                                                                                                  <  2:560006/234‑1 (MQ=255)                                                      tCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAacac                                                                                                                                                                              <  1:284626/236‑1 (MQ=255)                                                          aGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGc                                                                                                                                                                          <  1:83294/236‑1 (MQ=255)                                                            gggTCATGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAg                                                                                                                                                                                                                       <  1:121285/188‑1 (MQ=255)                                                             ggTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAac                                                                                                                                                                                <  1:234037/227‑1 (MQ=255)                                                                 aaGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATc                                                                                                                                                                    >  1:905049/1‑235 (MQ=255)                                                                 aaGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATc                                                                                                                                                                    <  1:932811/235‑1 (MQ=255)                                                                      gTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAg                                                                                                                                                                                                     <  1:150797/197‑1 (MQ=255)                                                                       ttCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTGCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCagcttcatccggtgctggtcgacgaatgcctgcagcagccggcccagcgggtccagtacggcgctgtc                                                                                                                                                                       <  1:122620‑M1/226‑69 (MQ=255)                                                                             cgcgAGCGCAACGATGCCTTCCACGTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTg                                                                                                                                                        <  1:219017/235‑1 (MQ=255)                                                                                      aaCGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGCGCTTCCAGCGACCGTTCGACCCGCCCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCaa                                                                                                                                                                                                                   <  2:293838/167‑1 (MQ=255)                                                                                            cccTTCCCCTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCg                                                                                                                                                                                                                                   <  1:282373/144‑1 (MQ=255)                                                                                               gtCCACCTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGa                                                                                                                                                                                  <  2:697838/190‑1 (MQ=255)                                                                                                         aCTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGCCCGTTCGACCCGCCCCACCAGGCCATGGCCGCCCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACt                                                                                                                                           <  1:95012/220‑1 (MQ=255)                                                                                                             gctgctGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTa                                                                                                                                             <  2:471310/214‑1 (MQ=255)                                                                                                                                agCTTCCAGCGCCCGTCCGCCCCGACCCCCCAGGCCATGGCCGCCCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAg                                                                                                                                                                                                                       <  2:102268/121‑1 (MQ=255)                                                                                                                                    cccAGCGACCGTTCGCCCCGACCCCCCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTAc                                                                                                                                            <  1:293224/191‑1 (MQ=255)                                                                                                                                                 cgacccgaccCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATc                                                                                                                                                                    <  1:77270/155‑1 (MQ=255)                                                                                                                                                  gacccgacccACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTgcc                                                                                  <  1:528794‑M2/236‑4 (MQ=255)                                                                                                                                                         cccACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCcggcgg                                                                            <  1:950341/235‑1 (MQ=255)                                                                                                                                                          ccaccaGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCcggcgg                                                                            <  1:785328/234‑1 (MQ=255)                                                                                                                                                          ccaccaGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCggcggc                                                                           >  1:894733/1‑235 (MQ=255)                                                                                                                                                                 gCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGt                                                                    >  1:63296/1‑235 (MQ=255)                                                                                                                                                                 gCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTGCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTgcctggcgcaggttggc                                                                    >  1:564483‑M2/1‑218 (MQ=255)                                                                                                                                                                     tGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGAGCCACGGTGACAGCGCCGTACTGGACCCGCt                                                                                                                                  >  2:204146/1‑169 (MQ=255)                                                                                                                                                                             cTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCcggcgg                                                                            <  1:187057/215‑1 (MQ=255)                                                                                                                                                                              tGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTAt                                                                  >  2:978713/1‑224 (MQ=255)                                                                                                                                                                                   ttGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGa                                                                                                                                                                                  <  2:308315/107‑1 (MQ=255)                                                                                                                                                                                    tGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGCCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGACCCACGGTGACAGCGCCGCACTGGACCCGCTg                                                                                                                                 >  2:102383/1‑155 (MQ=255)                                                                                                                                                                                         cgcgAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCagcttcatccggtgctggtcgacgaatgcctgcagcagccggcccagcgggtccagtccggcgctgtcaccgtggatctgatacggcccgtgttcctcgatcaggcggatgcctt                                                                                                                        >  1:905794‑M1/1‑44 (MQ=255)                                                                                                                                                                                         cgcgAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGc                                                                                                  >  1:146335/1‑181 (MQ=255)                                                                                                                                                                                         cgcgAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATCGTCGCa                                                                                                                                                                                                                        >  2:273410/1‑63 (MQ=255)                                                                                                                                                                                         cgcgAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATCGTCGCa                                                                                                                                                                                                                        <  1:273413/63‑1 (MQ=255)                                                                                                                                                                                              ccTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGAc                                      <  2:528791/235‑1 (MQ=255)                                                                                                                                                                                                            aaCTGGCGGCCAACCTGCGCCGGGCGGTCTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATtcgtc                                                                                                         <  2:322326/155‑1 (MQ=255)                                                                                                                                                                                                              cTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGACCCGCTGCTTTACTGa                       <  1:651463/235‑1 (MQ=255)                                                                                                                                                                                                                   ggcCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGACCCGCTGCTTTACTGAGGACgg                 >  1:474544/1‑236 (MQ=255)                                                                                                                                                                                                                    gcCAACCTGCGCCAGGCagcttcatccggtgctggtcgacgaatgcctgcagcagccggcccagcgggtccagtacggcgctgtcaccgtggatctgatacggcccgtgttcctcgatcaggcggatgcctttgtccttgacgttgcctgcgacaatcccggcaaacgcccggcgcaggttggccgccagttcatggggcggcagctcgcggcgcaagtccaggtcggccatggc                 >  1:564483‑M1/1‑17 (MQ=255)                                                                                                                                                                                                                         ccTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGACCCGCTGCTTTACTGAGGACGGGCAt             <  2:474541/234‑1 (MQ=255)                                                                                                                                                                                                                             cgcCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGACCCGCTGCTTTACTGAGGACGGGCATGGa          <  2:905046/233‑1 (MQ=255)                                                                                                                                                                                                                                  ggCagcttcatccggtgctggtcgacgaatgcctgcagcagccggcccagcgggtccagtacggcgctgtcaccgtggatctgatacggcccgtgttcctcgatcaggcggatgcctttgtccttgacgttgcctgcgacaatcccggaaaacgcccggcgcaggttggccgccagttcatggggcggcagctcgcggcgcaagtccaggtcggccatggcctggtgggtcgggtc  <  1:528794‑M1/236‑234 (MQ=255)                                                                                                                                                                                                                                  ggCGTTTTCCGGCATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGTAaccc                                                                                                                                                                              <  2:348229/64‑3 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                          CGAAATCATCATTGATGACCCGGCGGAAGTCGCCCGGCACATGGTCGAAGGCCTCAAAGCGGTCAAGCAGTTCCGCCGCGAGCGCAACGATGCCTTCCACTTCAACTGGCTGCTGAAGATCGAGGAGAGCTTCCAGCGACCGTTCGACCCGACCCACCAGGCCATGGCCGACCTGGACTTGCGCCGCGAGCTGCCGCCCCATGAACTGGCGGCCAACCTGCGCCGGGCGTTTTCCGGGATTGTCGCAGGCAACGTCAAGGACAAAGGCATCCGCCTGATCGAGGAACACGGGCCGTATCAGATCCACGGTGACAGCGCCGTACTGGACCCGCTGGGCCGGCTGCTGCAGGCATTCGTCGACCAGCACCGGATGAAGCTGCCCGGCGGCGCGGCGTATGTACCGTGCTATCAGGTGGCAACCTGACCCGCTGCTTTACTGAGGACGGGCATGGATGCCCGTC  >  AE015451/4160211‑4160671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.