New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4261045 =	57 (0.990)	4 (0.070)	4/324	NT	6.7%	coding (1717/2460 nt)	PP_3734	putative ABC transporter, permease protein
	?	AE015451	4261097 =	58 (1.060)					coding (1665/2460 nt)	PP_3734	putative ABC transporter, permease protein

ATGCCACCCCTTCAGCGTTCAGGTCGACACTCAAGCCGGCCAGGGTTGCCTGTGGCCAGTGGGCGCGCAACCAGCCGGCATTGACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCG  >  AE015451/4260817‑4261276                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                        agcatgaccgagggttttcgcaagacgtttgtcggttggcttgacctgcgcctctccgccgacctgtatgtcaccccgcgggacacggcccaaggcttgcagatagtcgagtggctcaagcagcagcccggggccagcgtggtcatgcccggctggcgcgcagacatgcagctgcaaggttggccggtgcaagtgcagggcattgtcgatcaccctgcctatcgtacgCGCTGGc                                                                                                                                                                                                                                   <  1:868661‑M1/7‑1 (MQ=255)                  tcgcaagacgtttgtcggttggcttgacctgcgcctctccgccgaccagtatgtcaccccgcgggacacggcccaaggcttgcagatagtcgagtggctcaagcagcagcccggggccagcgtggtcatgcccggctggcgcgcagacatgcagctgcaaggttggccggtgcaagtgcagggcattgtcgatcaccctgcctatcgtacgCGCt                                                                                                                                                                                                                                      >  2:655677‑M1/212‑215 (MQ=255)                       gTCGACACTCAAGCCGGCCAGGGTTGCCTGTGGCCAGTGGGCGCGCAACCAGCCGGCATTGACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGcgcgcg                                                                                                                                                                                                               >  2:1083063/1‑233 (MQ=255)                                  aGCCGGCCAGGGTTGCCTGTGGCCAGTGGGCGCGCAACCAGCCGGCATTGACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGa                                                                                                                                                                                                              <  2:673677/223‑1 (MQ=255)                                            ggTTGCCTGTGGCCAGTGGGCGCGCAACCAGCCGGCATTGACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAg                                                                                                                                                                                        <  1:1083066/235‑1 (MQ=255)                                                               gcgcgcAACCAGCCGGCATTGACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTg                                                                                                                                                                    >  1:854579/1‑236 (MQ=255)                                                                          gCCGGCATTGACCAGTACAGGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATg                                                                                                                                                          <  1:545184/235‑1 (MQ=255)                                                                                gggacacggcccaaggcttgcagatagtcgagtggctcaagcagcagcccggggccagcgtggtcatgcccggctggcgcgcagacatgcagctgcaaggttggccggtgcaagtgcagggcattgtcgatcaccctgcctatcgtacgCGCTg                                                                                                                                                                                                                                     <  2:101129‑M1/5‑1 (MQ=255)                                                                                gggacacggcccaaggcttgcagatagtcgagtggctcaagcagcagcccggggccagcgtggtcatgcccggctggcgcgcagacatgcagctgcaaggttggccggtgcaagtgcagggcattgtcgatcaccctgcctatcgtacgCGCTg                                                                                                                                                                                                                                     >  1:101131‑M1/150‑154 (MQ=255)                                                                                  gacacggcccaaggcttgcagatagtcgagtggctcaagcagcagcccggggccagcgtggtcatgcccggctggcgcgcagacatgcagctgcaaggttggccggtgcaagtgcagggcattggcgatcaccctgcctatcgtacgCGCTg                                                                                                                                                                                                                                     <  2:797479‑M1/5‑1 (MQ=255)                                                                                      cAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCa                                                                                                                                             <  1:62101/236‑1 (MQ=255)                                                                                        gTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCAcc                                                                                                                                           <  2:738603/236‑1 (MQ=255)                                                                                            agggcttgcagatagtcgagtggctcaagcagcagcccggggccagcgtggtcatgcccggctggcgcgcagacatgcagctgcaaggttggccggtgcaagtgcagggcattgtcgatcaccctgcctatcgtacgCGCTg                                                                                                                                                                                                                                     >  2:277783‑M1/138‑142 (MQ=255)                                                                                             tGCCCCTTGGGGTGGCCGTAATCGGCATAGATCCCCACCCCGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATg                                                                                                                                                          <  2:455697/216‑1 (MQ=255)                                                                                                cccGTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAAcc                                                                                                                                   <  1:339789/236‑1 (MQ=255)                                                                                                 ccTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCt                                                                                                                                  >  1:457096/1‑236 (MQ=255)                                                                                                     ggggTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGACTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTg                                                                                                                                <  1:158249/234‑1 (MQ=255)                                                                                                     ggggGTGCCATAATCGGCATAGATCCCCGCCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCGCGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAg                                                                                                                                                                            <  1:142466/190‑1 (MQ=255)                                                                                                      gggTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAg                                                                                                                                                                                                                                >  2:491588/1‑137 (MQ=255)                                                                                                      gggTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTtgct                                                                                                                                                                                                                           >  1:184016/1‑142 (MQ=255)                                                                                                      gggTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCa                                                                                                                                                   >  1:959316/1‑214 (MQ=255)                                                                                                      gggTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCa                                                                                                                              >  1:837626/1‑235 (MQ=255)                                                                                                      gggTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGGTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTGTCTGCCAGGcgcgcg                                                                                                                                                                                                               >  2:834010/1‑154 (MQ=255)                                                                                                             cGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGGGATCGACAATGCCCTGCACTTGCACCGGCCAAcc                                                                                                                                   >  1:353927/1‑223 (MQ=255)                                                                                                              gTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCt                                                                                                                           <  1:886104/230‑1 (MQ=255)                                                                                                              gTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCt                                                                                                                           >  2:886101/1‑230 (MQ=255)                                                                                                               tAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATg                                                                                                                                                          <  2:800823/198‑1 (MQ=255)                                                                                                               tAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATg                                                                                                                                                          >  1:800826/1‑198 (MQ=255)                                                                                                                    ggCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTgcg                                                                                                                <  1:820854/235‑1 (MQ=255)                                                                                                                     gCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTgcgcg                                                                                                              >  2:1004283/1‑236 (MQ=255)                                                                                                                         aGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTTCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGc                                                                                                                                                                                                 >  1:147604/1‑149 (MQ=255)                                                                                                                          gATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCa                                                                                                                                                                                                                                 >  2:162019/1‑116 (MQ=255)                                                                                                                           aTCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCg                                                                                                                                          <  1:332678/202‑1 (MQ=255)                                                                                                                              cccACCCCGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAg                                                                                                                                                                                        <  2:155110/153‑1 (MQ=255)                                                                                                                              cccACCACGGGCATGGCTGGGGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCAc                                                                                                                                                  <  2:527167/191‑1 (MQ=255)                                                                                                                              cccACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCgg                                                                                                      >  1:234017/1‑235 (MQ=255)                                                                                                                                 accccGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCGGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCAt                                                                                                  <  1:277949/236‑1 (MQ=255)                                                                                                                                   cacGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGcgcg                                                                                                                                                                                    <  2:579994/152‑1 (MQ=255)                                                                                                                                   cacGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGcgcg                                                                                                                                                                                    >  1:579997/1‑152 (MQ=255)                                                                                                                                   cacGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGccc                                                                                                                                                       >  2:477632/1‑181 (MQ=255)                                                                                                                                              ctggcGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACtt                                                                                                                                                >  1:250344/1‑177 (MQ=255)                                                                                                                                                    tGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCggg                                                                                <  1:483658/235‑1 (MQ=255)                                                                                                                                                    tGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCgg                                                                                 >  2:868658/1‑234 (MQ=255)                                                                                                                                                               aGCTGCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCAt                                                                                                  <  1:789345/206‑1 (MQ=255)                                                                                                                                                                   tCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGcc                                                                  >  2:803133/1‑234 (MQ=255)                                                                                                                                                                    cAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAg                                                                                                                                                                            <  2:452024/127‑1 (MQ=255)                                                                                                                                                                       gCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCg                                                             <  1:656239/235‑1 (MQ=255)                                                                                                                                                                              cccAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTAt                                                        >  2:566191/1‑233 (MQ=255)                                                                                                                                                                              cccAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGCCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGgctgc                                                                            >  2:502077/1‑213 (MQ=255)                                                                                                                                                                               ccAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTg                                                     >  1:560666/1‑235 (MQ=255)                                                                                                                                                                                 aggttggccggtgcaagtgcagggcattgtcgatcaccctgcctatcgtccgCGCGGGCcagtcgc                                                                                                                                                                                                                            <  1:783779‑M1/14‑4 (MQ=255)                                                                                                                                                                                   ttGCAGGTTCAAGCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAg                                                 <  1:199480/235‑1 (MQ=255)                                                                                                                                                                                    tGCAGGCTCAATCGCCCGGCCAACTGCTCACTGAGCATCACGGCCTGTCCGCTGGCCAGTTGCTGCCCGGCGCGCGAATCCTGTTCCAg                                                                                                                                                                                                  >  2:7421/1‑89 (MQ=255)                                                                                                                                                                                      cAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCggg                                                                                <  2:568218/201‑1 (MQ=255)                                                                                                                                                                                                agtgcagggcattgtcgatcaccctgcctatcgtacgCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGcc                                                                                                            >  2:293216‑M1/38‑163 (MQ=255)                                                                                                                                                                                                agtgcagggcattgtcgatcaccctgcctatcgtacgCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGcc                                                                                                            <  1:293219‑M1/126‑1 (MQ=255)                                                                                                                                                                                                 gCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTc                                   <  1:596583/235‑1 (MQ=255)                                                                                                                                                                                                  ccTGGCCAACTGCTCACGGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCC‑GGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTccc                                 <  1:838742/235‑1 (MQ=255)                                                                                                                                                                                                   cTGGCCAACTGCTCACTGAGCATCCCGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTccc                                 <  1:167465/235‑1 (MQ=255)                                                                                                                                                                                                    tGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTccc                                 <  2:457093/234‑1 (MQ=255)                                                                                                                                                                                                      gCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCgg                             <  1:803136/236‑1 (MQ=255)                                                                                                                                                                                                               tCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATc                                                       <  1:175762/201‑1 (MQ=255)                                                                                                                                                                                                               cgatcaccctgcctatcgtacgCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCt                                                      <  2:688265‑M1/180‑1 (MQ=255)                                                                                                                                                                                                               cgatcaccctgcctatcgtacgCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCt                                                      >  1:688268‑M1/23‑202 (MQ=255)                                                                                                                                                                                                                   tGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTccc                                 <  1:269538/219‑1 (MQ=255)                                                                                                                                                                                                                       cATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGgctgctgc                                                                         <  2:896031/175‑1 (MQ=255)                                                                                                                                                                                                                         tCACGGCTTGTCCGCTGGCCAGTTGCTGCCATGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGTGGGATCGACa                                                                                                                                                             >  1:134584/1‑89 (MQ=255)                                                                                                                                                                                                                             ggCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTccc                                 <  2:935557/209‑1 (MQ=255)                                                                                                                                                                                                                                 ggTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTcggc           <  2:931053/226‑1 (MQ=255)                                                                                                                                                                                                                                  gTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCa                                                                                                                                                                         >  2:678275/1‑68 (MQ=255)                                                                                                                                                                                                                                  gTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGgcg  >  1:500899/1‑235 (MQ=255)                                                                                                                                                                                                                                     CGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCCGCATGTCTGCGCGCCAGCCGGGCATGACCACGCtggcccccgg                                                                                <  2:966073‑M1/154‑4 (MQ=255)                                                                                                                                                                                                                                     CGCGGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGagag     >  1:722811‑M1/1‑229 (MQ=255)                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                        ATGCCACCCCTTCAGCGTTCAGGTCGACACTCAAGCCGGCCAGGGTTGCCTGTGGCCAGTGGGCGCGCAACCAGCCGGCATTGACCAGTACATGCCCCTTGGGGTTGCCGTAATCGGCATAGATCCCCACCACGGGCATGGCTGGCGTGCCTGCGGGCAGCTTCAGGCTGTCACCCAGTTGCAGGTTCAATCGCCTGGCCAACTGCTCACTGAGCATCACGGCTTGTCCGCTGGCCAGTTGCTGCCAGGCGCGCGAATGCTGTTCCAGCAATGGCCAGCGCGTACGATAGGCAGGGTGATCGACAATGCCCTGCACTTGCACCGGCCAACCTTGCAGCTGCATGTCTGCGCGCCAGCCGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCG  >  AE015451/4260817‑4261276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.