New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4444045	54 (0.940)	4 (0.070)	4/336	NT	7.5%	intergenic (‑64/+145)	nicT/nicF	Putative metabolite transport protein NicT/maleamate amidohydrolase
	?	AE015451	= 4444068	46 (0.810)					intergenic (‑87/+122)	nicT/nicF	Putative metabolite transport protein NicT/maleamate amidohydrolase

GTCTTCGAGCATCTGCAGCTTGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTGAGTTGCTGCATGGCATCCTGCCGGGTGACGACATCACCGTACTTGCTGTCGATGTCGAACAGGTTGGCTTC  >  AE015451/4443814‑4444279                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                           gTCTTCGAGCATCTGCAGCTTGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTTTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCAc                                                                                                                                                                                                                                          >  1:479372/1‑234 (MQ=255)             cTGCAGCTTGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTc                                                                                                                                                                                                                               <  2:362694/233‑1 (MQ=255)              tGCAGCTTGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCACTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  1:198858/236‑1 (MQ=255)              tGCAGCTGGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  2:144141/236‑1 (MQ=255)               gCAGCTTGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  1:925854/235‑1 (MQ=255)                      ggCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGgc                                                                                                                                                                                                                   <  1:465054‑M2/236‑3 (MQ=255)                          aaGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTg                                                                                                                                                                                                                <  1:378422/235‑1 (MQ=255)                             gcGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  1:261552/220‑1 (MQ=255)                                         cGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTgca                                                                                                                                                                                                   >  2:396824/1‑231 (MQ=255)                                                 aTAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAg                                                                                                                                                                                          >  2:438369/1‑234 (MQ=255)                                                         cGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGTAGAATGCGCGGCGTGCCTGGACAGCGCCTGAAGACCCCGa                                                                                                                                                                                           >  1:296833/1‑225 (MQ=255)                                                           aGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  1:848650/191‑1 (MQ=255)                                                           aGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCggg                                                                                                                                                                              <  1:139049/236‑1 (MQ=255)                                                                    aaaCACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           >  1:378021/1‑182 (MQ=255)                                                                    aaaCACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  2:378018/182‑1 (MQ=255)                                                                                  gATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGAC‑TTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCTGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAg                                                                                                                                                                                          >  2:766764/1‑200 (MQ=255)                                                                                     gAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTc                                                                                                                                                     >  1:1086810/1‑235 (MQ=255)                                                                                        ccTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATg                                                                                                                                                  <  1:178639/235‑1 (MQ=255)                                                                                           ccAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCccgccgcgtagaatgcg                                                                                                                                                                                                                           <  2:925232‑M1/159‑18 (MQ=255)                                                                                           ccAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCccgccgcgtagaatgcg                                                                                                                                                                                                                           >  1:925235‑M1/1‑142 (MQ=255)                                                                                                tGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           <  2:876317/154‑1 (MQ=255)                                                                                                tGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTAcg                                                                                                                                                                                                                           >  1:876320/1‑154 (MQ=255)                                                                                                    cTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCggg                                                                                                                                                                              <  1:616157/195‑1 (MQ=255)                                                                                                     ttGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCAccc                                                                                                                                                                    >  2:383228/1‑204 (MQ=255)                                                                                                      tGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCa                                                                                                                                   <  1:648413/236‑1 (MQ=255)                                                                                                         tGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGa                                                                                                                                                                 >  2:570268/1‑203 (MQ=255)                                                                                                             cAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGC                                                                                                                                                                                                                                            <  1:568422‑M1/124‑1 (MQ=255)                                                                                                               gcgcTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCt                                                                                                                           <  1:490981/235‑1 (MQ=255)                                                                                                                cgcTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCtt                                                                                                                          <  1:849724/235‑1 (MQ=255)                                                                                                                cgcTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCtt                                                                                                                          <  1:761161/235‑1 (MQ=255)                                                                                                                   tttCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGgc                                                                                                                                                                                                                   <  1:503096‑M2/143‑3 (MQ=255)                                                                                                                      cGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGtt                                                                                                                   >  1:709868/1‑236 (MQ=255)                                                                                                                       gTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTg                                                                                                                                                                                                                <  2:503093/142‑1 (MQ=255)                                                                                                                        tGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGGCGGGCTTCCCGCACCGGTCCTTGATTGTTAt                                                                                                                 >  1:160714/1‑236 (MQ=255)                                                                                                                        tGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCtt                                                                                                                          >  1:25709/1‑227 (MQ=255)                                                                                                                           cttGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAgcgc                                                                                                                                                                                                        <  2:241531/144‑1 (MQ=255)                                                                                                                            aTGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCTATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCCCGCCGCGTAGAATGCGCGGCGTGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCAccc                                                                                                                                                                    <  1:667916/181‑1 (MQ=255)                                                                                                                                  gATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCt                                                                                                                           <  2:640864/216‑1 (MQ=255)                                                                                                                                  gATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCt                                                                                                                           >  1:640867/1‑216 (MQ=255)                                                                                                                                        aCTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCg                                                                                                                                     <  2:569747/200‑1 (MQ=255)                                                                                                                                                 cGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCg                                                                                                                                                                   >  1:682997/1‑161 (MQ=255)                                                                                                                                                 cGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGtt                                                                                           >  2:563128/1‑233 (MQ=255)                                                                                                                                                 cGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGCTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAg                                                                                        >  1:583167/1‑236 (MQ=255)                                                                                                                                                    ggTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTc                                                                                                                                        >  2:625176/1‑185 (MQ=255)                                                                                                                                                      ttGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTc                                                                                                                                                                                     >  2:730871/1‑138 (MQ=255)                                                                                                                                                              gCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGTAGAATGCGCGGCGTGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGAcagc                                                                                                                                                             <  2:296830/154‑1 (MQ=255)                                                                                                                                                                aaTTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTg                                                                         <  1:438372/236‑1 (MQ=255)                                                                                                                                                                 aTTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTg                                                                         <  1:633071/235‑1 (MQ=255)                                                                                                                                                                     gCATTGCCTGTCTCCTGGCGGGCGGCTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCt                                                                                                     <  1:286193/203‑1 (MQ=255)                                                                                                                                                                         ttCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCt                                                                                                                           <  2:359122/177‑1 (MQ=255)                                                                                                                                                                           ccTGTCTCCTGGCGGGCGACTTTGTGGGTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCgg                                                                                    <  2:709865/214‑1 (MQ=255)                                                                                                                                                                                   cTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTGAGTTGCTGCATGGCATcc                                                       >  1:701780/1‑235 (MQ=255)                                                                                                                                                                                       cgggcgACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCt                                                                                                                                          >  2:946386/1‑148 (MQ=255)                                                                                                                                                                                                           ttAAGGCCAGCAGTTTTCGACGCGCCGGGCccgccgcgtagaatgcgcggcgt                                                                                                                                                                                                                     <  2:1069575‑M1/53‑24 (MQ=255)                                                                                                                                                                                                           ttAAGGCCAGCAGTTTTCGACGCGCCGGGCccgccgcgtagaatgcgcggcgt                                                                                                                                                                                                                     >  1:1069578‑M1/1‑30 (MQ=255)                                                                                                                                                                                                              cggCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTGAGTTGCTGCATGGCATCCTGCCGGGTGACGACATCACCGTACTTGc                           <  1:844013/235‑1 (MQ=255)                                                                                                                                                                                                                      ggTTGTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCt                                                                                                                           <  2:9528/131‑1 (MQ=255)                                                                                                                                                                                                                      agTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGt                                                                                                            <  1:376539/147‑1 (MQ=255)                                                                                                                                                                                                                      agTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGt                                                                                                            >  2:376536/1‑147 (MQ=255)                                                                                                                                                                                                                            cGACTCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCt                                                                                                                           <  2:77682/126‑1 (MQ=255)                                                                                                                                                                                                                             gACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTGAGTTGCTGCATGGCATCCTGCCGGGTGACGACATCACCGTACTTGCTGTCGATGTCGAAc             >  1:431363/1‑235 (MQ=255)                                                                                                                                                                                                                                  gcCGGGCAAGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTCATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTGAGTTGCTGCATGGCATCCTGCCGGGTGACGACATCACCGTACTTGCtgtcgatgtc                 <  1:580368/226‑1 (MQ=255)                                                                                                                                                                                                                                       gCccgccgcgtagaatgcgcggcgtgcccggcgcgtcgaaaactgctggccttaaaacaaccacaaagtcgcccgccaggagacaggaaatgccaattgcgaatgcaaccacggtccacagtgacatcgaccatggcacgaaagcgctgtacagcaagatcacctggaggctcatccccttcttgtgtttctgctacctcgcagcttatctggaccgcatcaatgtcggcttcgcc  <  1:465054‑M1/236‑235 (MQ=255)                                                                                                                                                                                                                                       gCccgccgcgtagaatgcgcggcgtgcccggcgcgtcgaaaactgctggccttaaaacaaccacaaagtcgcccgccaggagacaggaaatgccaattgcgaatgcaaccacggtccacagtgacatcgaccatggcacgaaa                                                                                               <  1:503096‑M1/143‑142 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                           GTCTTCGAGCATCTGCAGCTTGGCGAAGCCGACATTGATGCGGTCCAGATAAGCTGCGAGGTAGCAGAAACACAAGAAGGGGATGAGCCTCCAGGTGATCTTGCTGTACAGCGCTTTCGTGCCATGGTCGATGTCACTGTGGACCGTGGTTGCATTCGCAATTGGCATTTCCTGTCTCCTGGCGGGCGACTTTGTGGTTGTTTTAAGGCCAGCAGTTTTCGACGCGCCGGGCACGCCGCGCATTCTACGCGGCGGGCCTGGACAGCGCCTGAAGACCCCGAGTGCTCCTGCGGGGCGACCACCCGGACAGCAGGCGGTCATGGACGGGCTTCCCGCACCGGTCCTTGATTGTTATTGGGTAGGCGCTGCCCGGCGTTCAGCCGGCCAGGTGCCTGAGTTGCTGCATGGCATCCTGCCGGGTGACGACATCACCGTACTTGCTGTCGATGTCGAACAGGTTGGCTTC  >  AE015451/4443814‑4444279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.