New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4681791	45 (0.780)	5 (0.090)	4/324	NT	10.2%	coding (81/1431 nt)	mltD	Membrane‑bound lytic murein transglycosylase D
	?	AE015451	= 4681800	45 (0.820)					coding (90/1431 nt)	mltD	Membrane‑bound lytic murein transglycosylase D

TTTTGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCCGCGCATCGAGCAGCAGCGCTTGTGGTTCGCCAGCAACCC  >  AE015451/4681574‑4682018                                                                                                                                                                                                                          |                                                                                                                                                                                                                                    ttttGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgcca                                                                                                                                                                                                                    >  1:6235‑M2/1‑227 (MQ=255)  tttGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCaga                                                                                                                                                                                                                  <  1:969327/236‑1 (MQ=255)             gAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAg                                                                                                                                                                                                       >  1:656147/1‑236 (MQ=255)                                  cTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgccagggccagc                                                                                                                                                                                                            <  1:883705‑M2/210‑17 (MQ=255)                                  cTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgccagggccagc                                                                                                                                                                                                            >  2:883702‑M2/1‑194 (MQ=255)                                   tGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAAGCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgccagggccagc                                                                                                                                                                                                            >  1:525061‑M2/1‑193 (MQ=255)                                      tAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgc                                                                                                                                                                               <  1:358646/235‑1 (MQ=255)                                        aCCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTc                                                                                                                                                                                 <  2:757630/231‑1 (MQ=255)                                             aaGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACaa                                                                                                                                                                       >  1:955861/1‑236 (MQ=255)                                               gATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACt                                                                                                                                                                     <  1:553165/236‑1 (MQ=255)                                                    atCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACaa                                                                                                                                                                       <  2:429768/229‑1 (MQ=255)                                                       ccaAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctg                                                                                                                                                                                                                       >  2:680838‑M2/2‑173 (MQ=255)                                                          aGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCAcc                                                                                                                                                                                                             <  2:362376/185‑1 (MQ=255)                                                              aTGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTtggtg                                                                                                                                                                                                                            <  1:1027013/166‑1 (MQ=255)                                                              aTGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTtggtg                                                                                                                                                                                                                            >  2:1027010/1‑166 (MQ=255)                                                              aTGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAg                                                                                                                                                                                      >  1:349242/1‑204 (MQ=255)                                                              aTGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCa                                                                                                                                                      >  1:669103/1‑236 (MQ=255)                                                              aTGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCa                                                                                                                                                      >  1:843575/1‑236 (MQ=255)                                                                               aGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCGGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGCTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTcccag                                                                                                                                     >  1:267785/1‑234 (MQ=255)                                                                               aGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgcca                                                                                                                                                                                                                    <  1:599822‑M2/157‑9 (MQ=255)                                                                               aGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGt                                                                                                                                                                                                          >  2:579967/1‑167 (MQ=255)                                                                               aGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAg                                                                                                                                                                                      >  2:291822/1‑187 (MQ=255)                                                                                ggCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACg                                                                                                                                                           <  1:39344/213‑1 (MQ=255)                                                                                 gCCCGGAGCGGTTTCTAGAATCTCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACgg                                                                                                                                                          <  2:988376/213‑1 (MQ=255)                                                                                       aGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCaa                                                                                                                                                     <  2:623038/212‑1 (MQ=255)                                                                                              tCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccg                                                                                                                      >  1:1047802/1‑236 (MQ=255)                                                                                               cTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTcgcgcg                                                                                                                                                                            >  2:1003801/1‑181 (MQ=255)                                                                                                          gaccTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTCGCCGCAGAACCTCTCGTTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTtg                                                                                                                                                                                                                               <  2:220335/116‑1 (MQ=255)                                                                                                              tttttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGcgccgc                                                                                                      <  1:693583/236‑1 (MQ=255)                                                                                                              tttttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGcgcc                                                                                                        <  2:669100/234‑1 (MQ=255)                                                                                                                tttCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGcgccgc                                                                                                      <  2:969058/234‑1 (MQ=255)                                                                                                                                   tCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCCGGAt                                                                                                 >  1:550606/1‑220 (MQ=255)                                                                                                                                         gATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgccagggccagcgcactgatttgggccaggcgcgtcaggg                                                                                                                                                                                >  2:931090‑M2/1‑91 (MQ=255)                                                                                                                                         gATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGggctgccagggccagcgcactgatttgggccaggcgcgtcaggg                                                                                                                                                                                <  1:931093‑M2/135‑45 (MQ=255)                                                                                                                                          aTGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCTCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAgccggcc                                                                                                                   >  2:294974/1‑195 (MQ=255)                                                                                                                                            gTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCt                                                                        <  1:567034/236‑1 (MQ=255)                                                                                                                                            gTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTAGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCt                                                                        <  1:570269/236‑1 (MQ=255)                                                                                                                                              cTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGCTAGCGTTCGCGCGCACAACTACCAGGCACGGATCACGcacaca                                                                                                                                              >  2:197493/1‑162 (MQ=255)                                                                                                                                              cTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCt                                                                        >  2:567031/1‑234 (MQ=255)                                                                                                                                               ttCCCGTAGCCGCAGAACCTCTCGTTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGATCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTc                                                                      <  1:1031938/235‑1 (MQ=255)                                                                                                                                                                    tcATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGAt                                                 <  1:934816/235‑1 (MQ=255)                                                                                                                                                                         ccGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAgg                                                                                                                                                               >  2:955903/1‑120 (MQ=255)                                                                                                                                                                         ccGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAgg                                                                                                                                                               <  1:955906/120‑1 (MQ=255)                                                                                                                                                                         ccGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGACCAAGCACAAACCTTCCCCGCTGCTGGTCaac                                                                                                                         >  2:200130/1‑157 (MQ=255)                                                                                                                                                                              gCCCTGACGCGCCGGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCcgc                                       <  1:1053165/235‑1 (MQ=255)                                                                                                                                                                               cccTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatc                                                                                                                                          <  1:931093‑M1/135‑92 (MQ=255)                                                                                                                                                                               cccTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatc                                                                                                                                          >  2:931090‑M1/1‑44 (MQ=255)                                                                                                                                                                                 cTGCCGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCa                                                              <  1:291825/209‑1 (MQ=255)                                                                                                                                                                                 cTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAg                                                                                                    >  2:983195/1‑171 (MQ=255)                                                                                                                                                                                          cTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAAccc                                         <  1:688332/221‑1 (MQ=255)                                                                                                                                                                                             gCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCCGCGCATCGAGCCGCAgcg                       >  1:532707/1‑236 (MQ=255)                                                                                                                                                                                                     cAGTGCGCGGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCcgc                                       <  2:89468/212‑1 (MQ=255)                                                                                                                                                                                                      aGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCCGCGCATCGAGCAGCAGCGCTtgtg                 <  2:1047799/233‑1 (MQ=255)                                                                                                                                                                                                        tGCGCTGGCCATGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCa                                                              <  2:548653/186‑1 (MQ=255)                                                                                                                                                                                                           gcTGGCCCTGGCAGCCcaccaaggtggctgccagggccagcgcactgctttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatcggctgatacaggtatccgggcgaaaaagttcggcgattctagaaaccgctccgggcctggtcaacctttgaccatcacttgcgatatatcttgcggttatca                                    >  1:525061‑M1/1‑16 (MQ=255)                                                                                                                                                                                                           gcTGGCCCTGGCAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatcggctgatacaggtatccgggcgaaaaagttcggcgattctagaaaccgctccgggcctggtcaacctttgaccatcacttgcgatatatcttgcggttatcag                                   >  2:883702‑M1/1‑16 (MQ=255)                                                                                                                                                                                                           gcTGGCCCTGGCAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatcggctgatacaggtatccgggcgaaaaagttcggcgattctagaaaccgctccgggcctggtcaacctttgaccatcacttgcgatatatcttgcggttatcag                                   <  1:883705‑M1/210‑195 (MQ=255)                                                                                                                                                                                                                   tGGCAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatcggctgatacaggtatccgggcgaaaaagttcggcgattctagaaaccgctccgggcctggtcaacctttgaccatcacttgcgatatatcttgcggttatcagaaggtgtccttccaagacctcaaggcagcaaaa  >  1:6235‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                   tGGCAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatcggctgatacaggtatccgggcgaaaaagttcggcgattctagaaaccgctccgggcct                                                                                <  1:599822‑M1/157‑150 (MQ=255)                                                                                                                                                                                                                   tGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCCGCGCATCGAGCAGCAGCGCTTGTGGTTCGCCAGCAAcc   >  1:995497/1‑234 (MQ=255)                                                                                                                                                                                                                      cAGCCcaccaaggtggctgccagggccagcgcactgatttgggccaggcgcgtcagggcgacggaatgagaggttctgcggctacgggaagacatcggctgatacaggtatccgggcgaaaaagttcggcgattctagaaaccgctccgggcctggtcaacctttgaccatcacttgg                                                        >  2:680838‑M1/1‑5 (MQ=255)                                                                                                                                                                                                                          |                                                                                                                                                                                                                                    TTTTGCTGCCTTGAGGTCTTGGAAGGACACCTTCTGATAACCGCAAGATATATCGCAAGTGATGGTCAAAGGTTGACCAGGCCCGGAGCGGTTTCTAGAATCGCCGAACTTTTTCGCCCGGATACCTGTATCAGCCGATGTCTTCCCGTAGCCGCAGAACCTCTCATTCCGTCGCCCTGACGCGCCTGGCCCAAATCAGTGCGCTGGCCCTGGCAGCCACCTTGGTGGGCTGCCAGAGCACCCGTCAGCTCGACGAATCCGATAGCGTTCGCGCGCACAACTACCAGGCACGGATCAAGCACAAACCTTCCCCGCTGCTGGTCAAGCCGGCCGAACAGGCGCCGCAGGATGTCTGGGAGCGCATGCGCCAGGGCTTCGCCCTGCAGGACAGTATCGATGTCAACCCGCGCATCGAGCAGCAGCGCTTGTGGTTCGCCAGCAACCC  >  AE015451/4681574‑4682018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.