New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4703829	46 (0.800)	5 (0.090)	5/328	NT	10.6%	coding (1335/1695 nt)	kdpA	potassium‑transporting ATPase A chain
	?	AE015451	= 4703830	40 (0.720)					coding (1334/1695 nt)	kdpA	potassium‑transporting ATPase A chain

AGCTGTTCTGCCCCAGCGGCGCGCTTTTTTTCGCCGCCAGGCTGCCGGCCAACGCCAGTATCGGCAGGATGTAGCCGAAGCGGCCGATGAGCATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAACAGCAGCATGCCGTAGAGGCCCGCGCCGACGCCGCCGAATATCACCTCGCCGACCATCATGT  >  AE015451/4703594‑4704058                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                      aGCTGTTCTGCCCCAGCGGCGCGCTTTTTTTCGCCGCCAGGCTGCCGGCCAACGCCAGTATCGGCAGGATGTAGCCGAAGCGGCCGATGAGCATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCC                                                                                                                                                                                                                                       <  1:525577‑M1/236‑1 (MQ=255)            cccAGCGGCGCGCTTTTTTTCGCCGCCAGGCTGCCGGCCAACGCCAGTATCGGCAGGATGTAGCCGAAGCGGCCGATGAGCATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCcgggccgggc                                                                                                                                                                                                                              <  2:554681/234‑1 (MQ=255)                                                                                 cGGCCGATGAGCATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGGATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGGTGGTGACCGCCCCGGCCGGGCCGGGCa                                                                                                                                                                                                                             >  2:134038/1‑166 (MQ=255)                                                                                       aTGAGCATGGCCAGGCCGATCAGCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGgcg                                                                                                                                                                                                            <  1:931819/177‑1 (MQ=255)                                                                                          ggcATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGggccggggcggt                                                                                                                                                                                                                          >  2:764252‑M2/2‑148 (MQ=255)                                                                                            cATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACca                                                                                                                                                                             <  2:458154/203‑1 (MQ=255)                                                                                                  cAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGcc                                                                                                                                                                  <  2:796643/208‑1 (MQ=255)                                                                                                     gCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGc                                                                                                                                    <  1:159287/235‑1 (MQ=255)                                                                                                       cGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGcttg                                                                                                                                 >  2:638946/1‑235 (MQ=255)                                                                                                        gATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGc                                                                                                                                                                                                                          >  1:180694/1‑146 (MQ=255)                                                                                                        gATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTgg                                                                                                                                                                                                                       >  2:474097/1‑149 (MQ=255)                                                                                                        gATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAggg                                                                                                                                                                       >  2:467871/1‑197 (MQ=255)                                                                                                        gATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAggg                                                                                                                                                                       <  1:467874/197‑1 (MQ=255)                                                                                                         atcatcAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCgg                                                                                                                                                                                     <  2:718172/182‑1 (MQ=255)                                                                                                             tcaGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCCCGCCAACCGGCCTCACcagcc                                                                                                                                                                          >  2:914092/1‑188 (MQ=255)                                                                                                              caGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTGGGCCGAGCCCGAGGTAGAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGggccggggcggtcaccaacccgggggcgcatggtttcagcc                                                                                                                                                                                             >  1:1023159‑M2/1‑128 (MQ=255)                                                                                                                       gTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTggcggc                                                                                                                                                                                                                   >  2:40280/1‑138 (MQ=255)                                                                                                                                  tGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCcgggccgggc                                                                                                                                                                                                                              <  2:777654/116‑1 (MQ=255)                                                                                                                                  tGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCcgggccgggc                                                                                                                                                                                                                              >  1:777657/1‑116 (MQ=255)                                                                                                                                     cgcCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAat                                                                                                    >  1:1018920/1‑235 (MQ=255)                                                                                                                                     cgcCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAat                                                                                                    >  1:321345/1‑235 (MQ=255)                                                                                                                                           aCCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGccc                                                                                                                           <  1:948911/206‑1 (MQ=255)                                                                                                                                            cccGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGggccggggcggtcaccaacccgggggcgcat                                                                                                                                                                                                       <  1:296110‑M2/129‑32 (MQ=255)                                                                                                                                             ccGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGGGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGccc                                                                                           <  1:604695/236‑1 (MQ=255)                                                                                                                                                gCAAAGGCCGAGCCGTGGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAg                                                                                                                                     <  2:1048186/191‑1 (MQ=255)                                                                                                                                                cgaaaggCCGCGCCGTTGTTGGCCGAGCCCGGGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCC                                                                                                                                                                                                                                       <  2:180692‑M1/91‑1 (MQ=255)                                                                                                                                                          aGCCGTTGTTGGCCGAGCCCAGGGTATAGGCGTACAGCAACTGGCTGAAGCCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGggccggggcggtcaccaac                                                                                                                                                                                                                   >  2:296107‑M2/1‑84 (MQ=255)                                                                                                                                                            ccGTTGTTGGCCGAGCCCGGGGTATAGGCGTACAGCACCTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTg                                                                                                                              <  2:130229/186‑1 (MQ=255)                                                                                                                                                             cGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTa                                                                                                                      <  1:914095/193‑1 (MQ=255)                                                                                                                                                              gttgttGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACcgc                                                                            <  2:786300/234‑1 (MQ=255)                                                                                                                                                                 gttgGCCGAGCCCGAGGTAGAGGCGTACAGCAACTGGCTGAAACCAGGCGCCCCCGGGTTGGTGACCGCCCCGGCCGggccggggcggtcaccaacccgggggcgcatg                                                                                                                                                                                                      >  2:323934‑M2/1‑77 (MQ=255)                                                                                                                                                                  ttgGCCGCGCCCGAGGTATAGGCGTACAGCAACGGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGggccggggcggtcaccaacccgggggcgcatggtttcagccagttgctgtacg                                                                                                                                                                                 >  2:161256‑M2/1‑76 (MQ=255)                                                                                                                                                                       cGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACca                                                                                                                                                                             <  1:837265/128‑1 (MQ=255)                                                                                                                                                                         aGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCCGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAAc                                                               >  1:499387/1‑236 (MQ=255)                                                                                                                                                                           cccGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGTGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGaa                                                                                  <  2:744876/215‑1 (MQ=255)                                                                                                                                                                            ccGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGCTGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCCGccg                                                                                                                                     >  2:206083/1‑161 (MQ=255)                                                                                                                                                                             cGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGcttctt                                                                                                                               <  2:517687/168‑1 (MQ=255)                                                                                                                                                                             cGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGcttctt                                                                                                                               >  1:517690/1‑168 (MQ=255)                                                                                                                                                                              gAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCg                                                                                                                 <  2:843821/181‑1 (MQ=255)                                                                                                                                                                                        cGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCcggccggggcggtcaccaacccgggggcgcatggtttcagcccgttgctgtacgcctatacctcgggcgcggccaa                                                                                                                                                           >  2:161256‑M1/1‑53 (MQ=255)                                                                                                                                                                                              gCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACgg                                                                                                         <  2:893352/173‑1 (MQ=255)                                                                                                                                                                                              gCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACcg                                                                             >  1:31773/1‑201 (MQ=255)                                                                                                                                                                                              gCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAACAGCAGCATGCCGTAGAGGcc                                           >  1:532811/1‑235 (MQ=255)                                                                                                                                                                                                  cTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGcc                                                                                                                            <  1:157101/150‑1 (MQ=255)                                                                                                                                                                                                    ggCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCcggccggggcggtcaccaacccgggggcgcatggtttcagccagttgctgtacgcctctacctcgggctcggcccacaacggctcggcctttgccgggtttggcgccaacaccgtgtaccacaacctg                                                                                                       >  1:1023159‑M1/1‑41 (MQ=255)                                                                                                                                                                                                           aCCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGcttct                                                                                                                                <  1:181496/137‑1 (MQ=255)                                                                                                                                                                                                             caggcgcCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGaa                                                                                  <  2:321342/178‑1 (MQ=255)                                                                                                                                                                                                             cATGCGCCCCCGGGTTGGTGACCGCCCCGGCCcggccggggcggtcaccaacccgggggcgcctggtttcagccagttgctgtacgcctctacctcgggctcggccaac                                                                                                                                                          >  2:323934‑M1/1‑32 (MQ=255)                                                                                                                                                                                                              aTGCGCCCCCGGGTTGGTGACCGCCCCGGCCcggccggggcggtcaccaacccgggggcgcatggtttcagccagttgctgtacgcctatacctcgggctcggccaacaacggctcggcctttgccggg                                                                                                                                     <  1:296110‑M1/129‑99 (MQ=255)                                                                                                                                                                                                                  gcCCCCGGGTTGGTTACCGCCCCGGCCGGGCCGGGCAGGc                                                                                                                                                                                                                          >  2:206077/1‑40 (MQ=255)                                                                                                                                                                                                                   ccccgGGGTGGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGCTGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGaa                                                                                  <  2:322838/175‑1 (MQ=255)                                                                                                                                                                                                                       cGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCg                                                                                                                 <  1:512237/140‑1 (MQ=255)                                                                                                                                                                                                                       cGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAACAGCAGCATGCCGTAGAGGccc                                          >  2:944493/1‑211 (MQ=255)                                                                                                                                                                                                                          gTTGGTGACCGCCCCGGCCcggccggggcggtcaccaacccgggggcgcatggcttcagccagttgctgtacgcctataccctgggctcggccaacaacggct                                                                                                                                                   >  2:296107‑M1/1‑19 (MQ=255)                                                                                                                                                                                                                              gTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAACAGCAGCATGCCGTAGAGGCCCGCGCCGACGCCGCCGAATATCACCTCGCCGa           <  1:944496/235‑1 (MQ=255)                                                                                                                                                                                                                               cgACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGaa                                                                                  <  1:435801/162‑1 (MQ=255)                                                                                                                                                                                                                                 aCCGCCCCGGCCcggccggggcggtcaccaacccgggggcgcatggtttcagccagttgctgtacgcctatacctcgggctcggccaacaacggctcggcctttgccgggtttggcgccaacaccgtgtaccacaacctgatgatcggcctggccatgcc                                                                                   >  2:764252‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                                 aCCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAg                                                                      >  2:1087604/1‑173 (MQ=255)                                                                                                                                                                                                                                    gCCCCGGCCGGGCCGGGCAGGCTGGCGGCGAGGGCGCCAAGTACCAGCACGCCAACCGGCATCGCCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCg                                                                                                                 <  2:127721/127‑1 (MQ=255)                                                                                                                                                                                                                                      cccGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAACAGCAGCATGCCGTAGAGGCCCGCGCCGACGCCGCCGAATATCACCTCGCCGACCATCATGt  >  1:474486/1‑236 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                      AGCTGTTCTGCCCCAGCGGCGCGCTTTTTTTCGCCGCCAGGCTGCCGGCCAACGCCAGTATCGGCAGGATGTAGCCGAAGCGGCCGATGAGCATGGCCAGGCCGATCATCAGGTTGTGGTACACGGTGTTGGCGCCAAACCCGGCAAAGGCCGAGCCGTTGTTGGCCGAGCCCGAGGTATAGGCGTACAGCAACTGGCTGAAACCATGCGCCCCCGGGTTGGTGACCGCCCCGGCCGGGCCGGGCAGGCTGGCGGCGATGGCGCCAAGTACCAGCACGCCAACCGGCATCACCAGCAGGGTTGCCACCAGAAGCTGCACTTCACGGGCCTGCAGCTTCTTGCCCAGGTATTCCGGGGTACGGCCAATCATCAGCCCGGCCAGGAACACCGCGATAAGGACGAACAGCAGCATGCCGTAGAGGCCCGCGCCGACGCCGCCGAATATCACCTCGCCGACCATCATGT  >  AE015451/4703594‑4704058

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.