New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4848146 =	44 (0.760)	3 (0.050)	3/328	NT	7.0%	coding (235/684 nt)	PP_4263	putative membrane‑bounded cytochrome biogenesis cycZ‑like domain, copper tolerance protein
	?	AE015451	4848162 =	38 (0.690)					coding (251/684 nt)	PP_4263	putative membrane‑bounded cytochrome biogenesis cycZ‑like domain, copper tolerance protein

CCTGACCTGCTTGCGCTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTG  >  AE015451/4847915‑4848361                                                                                                                                                                                                                                           |                                                                                                                                                                                                                        tgccctggctggccgcccacagcagggtgctgtacaccagcccgcacggcagccagccccagagggcgcccagcagcaatgcccgagggaggctggacactggcagcaatcgcgacgccaccggctggatatgccgccacagcccgcggcccagtgcctcgatacgggtcagcccgctccaccagccggccaggtacaggcccatggcaatcagcagcagtgccgcgaccacccg                                                                                                                                                                                                                         >  1:491726‑M1/235‑235 (MQ=255)  cTGACCTGCTTGCGCTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAgc                                                                                                                                                                                                                     >  1:739157/1‑235 (MQ=255)    cctggctggccgcccacagcagggtgctgtacaccagcccgcacggcagccagccccagagggcgcccagcagcaatgcccgagggaggctggacactggcagcaatcgcgacgccaccggctggatatgccgccacagcccgcggcccagtgcctcgatacgggtcagcccgctccaccagccggccaggtacaggcccatggcaatcagcagcagtgccgcgaccacccGCAgc                                                                                                                                                                                                                     >  1:404634‑M1/232‑236 (MQ=255)       cTGCTTGCGCTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAgcgctgg                                                                                                                                                                                                                <  1:426637/235‑1 (MQ=255)            tGCGCTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAgcgctggcgctg                                                                                                                                                                                                           >  1:445368/1‑235 (MQ=255)            cgcgcTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGGGGCCAGCAGCCCGGcg                                                                                                                                                                                                                       >  1:865747/2‑222 (MQ=255)              cgcTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCgg                                                                                                                                                                                                        >  1:106436/1‑236 (MQ=255)                 tgctgGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGggtg                                                                                                                                                                                                     >  1:559101/1‑236 (MQ=255)                                tGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGTGCGGCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCAct                                                                                                                                                                                          <  1:1078153/235‑1 (MQ=255)                                   tCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTcgcg                                                                                                                                                                                               <  1:135353/224‑1 (MQ=255)                                         gCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCa                                                                                                                                                                                            <  1:90570/221‑1 (MQ=255)                                          ccTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAgcgctggcg                                                                                                                                                                                                              >  2:1032939/1‑202 (MQ=255)                                            tGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATg                                                                                                                                                                          <  1:197868/236‑1 (MQ=255)                                                 gggggCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCActgctg                                                                                                                                                                                      >  1:374197/1‑219 (MQ=255)                                                       ggTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCt                                                                                                                                                               >  1:798244/1‑236 (MQ=255)                                                             tGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCg                                                                                                                                                                                                         <  1:354272/188‑1 (MQ=255)                                                                      aTGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGa                                                                                                                                                 >  1:239068/1‑235 (MQ=255)                                                                             gCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGc                                                                                                                                                                              >  1:158758/1‑202 (MQ=255)                                                                             gCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCCGCGGGTGGTCGCGGCActgc                                                                                                                                                                                        >  2:767448/1‑192 (MQ=255)                                                                              cGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCgg                                                                                                                                             <  1:582445/234‑1 (MQ=255)                                                                               ggTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCGTGGGCCTGTAcccg                                                                                                                                                              >  2:381052/1‑214 (MQ=255)                                                                                      tGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGc                                                                                                                                               <  2:798241/224‑1 (MQ=255)                                                                                           ggCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGa                                                                                                                              >  1:734203/1‑236 (MQ=255)                                                                                              gcACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTg                                                                                                                                         >  1:216214/1‑222 (MQ=255)                                                                                               ggacactggcagcaatcgcgacgccaccggctggatatgccgccacagcccgcggcccagtgcctcgatacgggtcagcccgctccaccagccggccaggtacaggcccatggcaatcagcagcagggccgcgaccacccGCAg                                                                                                                                                                                                                      <  1:462168‑M1/4‑1 (MQ=255)                                                                                               cACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCgg                                                                                                                                             <  2:374194/217‑1 (MQ=255)                                                                                                            caccccccccGAACACCGCGGCAAGCGCCTGCGCCTGTTGATGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTg                                                                                                                                                              <  1:216070/184‑1 (MQ=255)                                                                                                                 cccccGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCGGCCCgg                                                                                                                                                                                                                         >  1:710861/1‑123 (MQ=255)                                                                                                                  ccccGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGCTTGCCATGGGCCTGTACCTGGCCGGCTGGGGGAGCggg                                                                                                                                            >  1:680107/1‑199 (MQ=255)                                                                                                                  ccccGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGGGGTCGCGGCGCTGCTGCTGATTg                                                                                                                                                                               >  2:469636/1‑164 (MQ=255)                                                                                                                      gAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGGGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTggcggc                                                                                                    >  1:523207/1‑235 (MQ=255)                                                                                                                               ggCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGc                                                                                           >  1:882731/1‑235 (MQ=255)                                                                                                                                     cgcctgcgcctgTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCActgctgct                                                                                                                                                                                    <  2:158756/140‑1 (MQ=255)                                                                                                                                           cgcctgTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCt                                                                                                                                          <  2:445365/176‑1 (MQ=255)                                                                                                                                           cgcctgTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCt                                                                                                            <  2:559098/206‑1 (MQ=255)                                                                                                                                            gcctgTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGAc                                                                                                                                       <  2:603401/178‑1 (MQ=255)                                                                                                                                                 cgcggcccagtgcctcgatacgggtcagcccgctccaccagccggccaggtacaggcccatggcaatcagcagcagtgccgcgaccacccGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTg                                                                                                                                                                               <  1:807309‑M1/43‑1 (MQ=255)                                                                                                                                                 cgcggcccagtgcctcgatacgggtcagcccgctccaccagccggccaggtacaggcccatggcaatcagcagcagtgccgcgaccacccGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTg                                                                                                                                                                               >  2:807306‑M1/91‑133 (MQ=255)                                                                                                                                                                       gcATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCtggtg                                                                                                                                                   >  2:764475/1‑139 (MQ=255)                                                                                                                                                                             tCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGGTGCGGGTGGTCGCGGCACTGCTGCTGATTg                                                                                                                                                                               <  1:808730/105‑1 (MQ=255)                                                                                                                                                                                    tGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTgg                                     <  1:149423/236‑1 (MQ=255)                                                                                                                                                                                        tGCGCCGGCCTGTTGCTGGGCGTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTGCCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTcg                                                                                <  1:342245/189‑1 (MQ=255)                                                                                                                                                                                            ccGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGc                                                                                                                           <  2:923480/142‑1 (MQ=255)                                                                                                                                                                                             cGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGGGCGGGCTGACCCGGATCGAGGCACTGGGCCGCGGGGTGGGGCGGCATATCCAGCCg                                                                                         >  2:353176/1‑175 (MQ=255)                                                                                                                                                                                              ggCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAgt                                                                  <  2:882728/197‑1 (MQ=255)                                                                                                                                                                                                  tGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTgggg                        >  1:873787/1‑235 (MQ=255)                                                                                                                                                                                                    ttGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCgg                                                                                                                                             <  2:174001/116‑1 (MQ=255)                                                                                                                                                                                                    ttGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGcc                                <  1:284526/225‑1 (MQ=255)                                                                                                                                                                                                            ccTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGt             <  1:459919/236‑1 (MQ=255)                                                                                                                                                                                                                   ggCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCct                              >  1:294569/1‑212 (MQ=255)                                                                                                                                                                                                                   ggCTGGGCCGTGGCCAGCAGCCCAGCAGCGCTGGCGCTGCGGGTGGTCGCgg                                                                                                                                                                                              >  2:25417/1‑52 (MQ=255)                                                                                                                                                                                                                        ggCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGgtg  >  1:449496/1‑235 (MQ=255)                                                                                                                                                                                                                           agtgccgcgaccacccGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGGCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCGTTGCTGCTggg                                    <  1:146067‑M1/182‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                        CCTGACCTGCTTGCGCTGCTGGGCTCGGCACTGGTCCTTGGCCTGCTAGGGGGCGGTCACTGCCTGGGCATGT‑‑‑GCGGTGGCCTGATGGGCGCACTAACCTTGGCCATCCCCCCCGAACAACGCGGCAAGCGCCTGCGCCTGTTGCTGGCGTACAACCTGGGGCGCATTTTCAGCTATGCCTGCGCCGGCCTGTTGCTGGGCCTGGCCGGCTGGGCCGTGGCCAGCAGCCCGGCAGCGCTGGCGCTGCGGGTGGTCGCGGCACTGCTGCTGATTGCCATGGGCCTGTACCTGGCCGGCTGGTGGAGCGGGCTGACCCGTATCGAGGCACTGGGCCGCGGGCTGTGGCGGCATATCCAGCCGGTGGCGTCGCGATTGCTGCCAGTGTCCAGCCTCCCTCGGGCATTGCTGCTGGGCGCCCTCTGGGGCTGGCTGCCGTGCGGGCTGGTG  >  AE015451/4847915‑4848361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.