New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5036643 =	NA (NA)	3 (0.050)	3/324	NT	NA	coding (134/336 nt)	PP_4442	transposase
	?	AE015451	5036738 =	NA (NA)					coding (229/336 nt)	PP_4442	transposase

CCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAG  >  AE015451/5036541‑5036717                                                                                                       |                                                                           cctaGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCATCGGGACGACTGAATCAAg  >  1:784858/4‑177 (MQ=0)                                                                                                       |                                                                           CCGAGCCGATGGATATGCGCGCCGGCACCGAAACGGCATTGGCCCGGGTGATCGCGGTGTTCGGTGCGGCGAAGCCGCACTGCGCTTATCTGTTCGCCAATCGCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAG  >  AE015451/5036541‑5036717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.