New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5336714 =	42 (0.730)	6 (0.110)	6/334	NT	12.6%	coding (164/1443 nt)	PP_4696	Nitrogen regulation protein NR(I)
	?	AE015451	5336732 =	42 (0.750)					coding (182/1443 nt)	PP_4696	Nitrogen regulation protein NR(I)

CCCCGGCATGTCGTAGCGACGTCCCCTGAAATTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCGGCAGAACGCCCCCGCTGCTGCACCGCCAGCCGAGCCACG  >  AE015451/5336493‑5336936                                                                                                                                                                                                                              |                                                                                                                                                                                                                               ccccGGCATGTCGTAGCGACGTCCCCTGAAATTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCg                                                                                                                                                                                                                  <  1:370429/236‑1 (MQ=255)              tAGCGACGTCCCCTGAAATTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCt                                                                                                                                                                                                        >  2:558911/1‑233 (MQ=255)              caGCGACGTCCCCTGAAATTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCt                                                                                                                                                                                                        <  1:478982/232‑1 (MQ=255)                       ccccTGAAATTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCg                                                                                                                                                                                             >  1:915584/1‑235 (MQ=255)                          cTGAAAGTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCa                                                                                                                                                                                         <  1:174909/236‑1 (MQ=255)                             aaaTTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCa                                                                                                                                                                                         <  2:1034859/233‑1 (MQ=255)                                             agagaATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCt                                                                                                                                                                                               >  2:857015/1‑211 (MQ=255)                                             agagaATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCCCCCGGCa                                                                                                                                                                                                               >  2:304724/1‑195 (MQ=255)                                                      aaTCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAg                                                                                                                                                                                        >  1:806927/1‑209 (MQ=255)                                                             gCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCGGGCGCGCCGGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCgg                                                                                                                                                                              <  1:995411/212‑1 (MQ=255)                                                                   agttCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTgc                                                                                                                                                <  1:217654/234‑1 (MQ=255)                                                                         gATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCGGGCGCGCCGGGCCCCGAGCTGag                                                                                                                                                                                                     >  2:995408/1‑176 (MQ=255)                                                                         gATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCgg                                                                                                                                                                              >  2:460389/1‑200 (MQ=255)                                                                                   gACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCt                                                                                                                                                                          >  2:217652/1‑194 (MQ=255)                                                                                                 ccGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTgg                                                                                                                                    >  1:971066/1‑218 (MQ=255)                                                                                                     ccGGCCCGGCGTCGCCTGCGTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCAGCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCTCCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGgc                                                                                                                   <  2:566126/230‑1 (MQ=255)                                                                                                          ccTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGAc                                                                                                          <  1:1002074/235‑1 (MQ=255)                                                                                                            tGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAAt                                                                                                                       <  2:975281/220‑1 (MQ=255)                                                                                                            tGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATggg                                                                                                                    >  2:1046898/1‑223 (MQ=255)                                                                                                                      gCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGc                                                                                             >  1:85471/1‑236 (MQ=255)                                                                                                                              ggAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCCGGAACGCTTCAGCATTGCCGCTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCa                                                                                                                                                                     <  2:223153/156‑1 (MQ=255)                                                                                                                                   cAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTgcgcc                                                                                                                                             >  2:790309/1‑174 (MQ=255)                                                                                                                                         cAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCgg                                                                                                                                       >  2:947315/1‑175 (MQ=255)                                                                                                                                         cAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATgg                                                                                                                     <  1:1055696/193‑1 (MQ=255)                                                                                                                                              cAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGAtgct                                                                       <  1:802103/234‑1 (MQ=255)                                                                                                                                                     accgctgagcgcaggctggcgtaactggtcatgatcagcaccggggtgccctggccgagcttgatcagctcggGGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGt                                                                                                                                                             <  1:155551‑M1/68‑1 (MQ=255)                                                                                                                                                       cGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAg                                                            <  1:783598/236‑1 (MQ=255)                                                                                                                                                         gCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTgcaggcag                                                               >  1:747906/1‑231 (MQ=255)                                                                                                                                                         gCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAgcg                                                          >  1:822096/1‑236 (MQ=255)                                                                                                                                                                      ggcgtaactggtcatgatcagcaccggggtgccctggccgagcttgatcagcgcggTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATc                                                                                                    <  1:929248‑M1/125‑1 (MQ=255)                                                                                                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                                                                                                      >  1:893163/1‑141 (MQ=255)                                                                                                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGt                                                                                                                                      <  2:893160/141‑1 (MQ=255)                                                                                                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGGGGACTACATCGCCAAGCCCTTCGACCACGACgag                                                                            >  1:357626/1‑199 (MQ=255)                                                                                                                                                                            ggAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCCCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCCCTCAGCGGTGGACTCGATGAAAATGGGCGCGGtt                                                                                                             >  2:771467/1‑165 (MQ=255)                                                                                                                                                                                   ttCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCGGCAGAACGc                                <  1:268042/236‑1 (MQ=255)                                                                                                                                                                                    tgatcagcaccggggtgccctggccgagcttgatcagctcggTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGGTGaaaa                                                                                                                        <  1:129746‑M1/105‑1 (MQ=255)                                                                                                                                                                                     cAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGAc                                                                                                          >  1:730690/1‑160 (MQ=255)                                                                                                                                                                                     cAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCACGCCCTTCGa                                                                                      >  1:187977/1‑180 (MQ=255)                                                                                                                                                                                          ttGCCACTTTCGACCTCATCGTCAGCGACCTGCGCGTGCCCGGCGCGCCCGGCACCGAGCTGATCAGGCTCGGCCAGGGCACCCAGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACAt                                                                                                     >  2:751244/1‑160 (MQ=255)                                                                                                                                                                                                cTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCt                                                  >  1:1001175/1‑205 (MQ=255)                                                                                                                                                                                                  ttCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCgg                                        >  2:423429/1‑213 (MQ=255)                                                                                                                                                                                                   tgccctggccgagcttgatcagctcggTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCGGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGAtgctgc                                                                     <  1:830296‑M1/156‑1 (MQ=255)                                                                                                                                                                                                   tCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTgcaggc                                                                 <  2:37036/187‑1 (MQ=255)                                                                                                                                                                                                          cATCGTCAGCGTCCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGAGCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATgg                                                                                                                     <  2:21971/128‑1 (MQ=255)                                                                                                                                                                                                                    cgccTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCGGCAGAACGCCCCCGCTGCTGCACCGCCAGCCGAGCCAcg  <  1:304727/231‑1 (MQ=255)                                                                                                                                                                                                                       agctcggTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCGGCAGAACGCCCCCGCTGCTGCACCGCCAGCCGAg       >  2:561215‑M1/8‑225 (MQ=255)                                                                                                                                                                                                                       agctcggTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCGGCAGAACGCCCCCGCTGCTGCACCGCCAGCCGAg       <  1:561218‑M1/218‑1 (MQ=255)                                                                                                                                                                                                                        tGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGAGCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTgcaggc                                                                 <  1:134680/166‑1 (MQ=255)                                                                                                                                                                                                                            ggTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGAtcc                                                                                                                                                                     <  2:128457‑M1/60‑2 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                               CCCCGGCATGTCGTAGCGACGTCCCCTGAAATTCGAGACCGTCGAGAGAATTGAATCAATGCCGCACATTCTGATCGTCGAAGACGAAACCATCATCCGCTCGGCCCTGCGTCGCCTGCTTGAGCGGAACCAGTACCAGGTCAGCGAGGCCGGCTCGGTGCAGGAAGCCCAGGAACGCTTCAGCATTGCCACTTTCGACCTCATCGTCAGCGACCTGCGCCTGCCCGGCGCGCCCGGCACCGAGCTGATCAAGCTCGGCCAGGGCACCCCGGTGCTGATCATGACCAGTTACGCCAGCCTGCGCTCAGCGGTGGACTCGATGAAAATGGGCGCGGTGGACTACATCGCCAAGCCCTTCGACCACGACGAGATGCTGCAGGCAGTAGCGCGTATTCTGCGTGACCGGCAGAACGCCCCCGCTGCTGCACCGCCAGCCGAGCCACG  >  AE015451/5336493‑5336936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.