New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5655785	56 (0.970)	3 (0.050)	3/326	NT	5.5%	coding (1910/1998 nt)	tktA	transketolase A
	?	AE015451	= 5655842	50 (0.910)					coding (1853/1998 nt)	tktA	transketolase A

ACGAGACAGTTCAATTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCACGCGCACCTTGCGGCCTTGCTCGGTCAGCTTGTCGAAGGCCTGAACAGCCAGGCCCACTT  >  AE015451/5655555‑5656016                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                        aCGAGACAGTTCAATTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCg                                                                                                                                                                                                                                    >  1:958047/1‑236 (MQ=255)             aaTTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATg                                                                                                                                                                                                                        >  1:977489/1‑236 (MQ=255)              aTTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAggtg                                                                                                                                                                                                                              >  2:949489/1‑229 (MQ=255)              aTTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAggtg                                                                                                                                                                                                                              <  1:949492/229‑1 (MQ=255)              aTTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGc                                                                                                                                                                                                                       >  1:391648/1‑236 (MQ=255)                                aaTTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTcc                                                                                                                                                                                                      >  1:569821/1‑235 (MQ=255)                                      cGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGa                                                                                                                                                                                               <  1:881559/236‑1 (MQ=255)                                        gtgtGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGAc                                                                                                                                                                                              <  2:909205/235‑1 (MQ=255)                                                  cgcgGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCAcc                                                                                                                                                                                                                                     >  1:934436/1‑186 (MQ=255)                                                          cgcCCGCTCACACAGGGTTTCATGCAGCCTCTGGGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAagtc                                                                                                                                                                            >  1:284713‑M2/2‑231 (MQ=255)                                                                   ccACAGGGTTTCATGCAACCTCGGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAg                                                                                                                                                                                 <  1:145591/221‑1 (MQ=255)                                                                    cacaGGGTTTCATGCAACCTCTGTGGTAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCa                                                                                                                                                                                                     <  1:999258/200‑1 (MQ=255)                                                                    cacaGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAg                                                                                                                                                                 >  1:862114/1‑236 (MQ=255)                                                                            ttCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATg                                                                                                                                                         >  1:366363/1‑236 (MQ=255)                                                                                tGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTAACAGAagt                                                                                                                                                                             <  1:86329‑M2/212‑4 (MQ=255)                                                                                     ccTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCa                                                                                                                                                                                                     <  2:352515/183‑1 (MQ=255)                                                                                      ctctGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCa                                                                                                                                                                  >  1:248208/1‑217 (MQ=255)                                                                                        ctGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGCTGATACGACCTTCCAGGCCGACGGACTTGTACCAGAAGTCGGCGTgg                                                                                                                                                                     >  1:932429/1‑212 (MQ=255)                                                                                        ctGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATa                                                                                                                                                                                                               >  2:687518/1‑170 (MQ=255)                                                                                        ctGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATa                                                                                                                                                                                                               <  1:687521/170‑1 (MQ=255)                                                                                        ctGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCa                                                                                                                                             >  1:752892/1‑236 (MQ=255)                                                                                              gAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGGACCGACt                                                                                                                                       >  1:870154/1‑236 (MQ=255)                                                                                                gCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACg                                                                                                                                                                                             <  2:814382/180‑1 (MQ=255)                                                                                                 cGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCgatga                                                                                                                                                                                                                 <  2:278066/159‑1 (MQ=255)                                                                                                  gggCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATgcg                                                                                                                                                 <  1:151884/222‑1 (MQ=255)                                                                                                   ggCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAggt                                                                                                                                                                                                                               <  1:886740/143‑1 (MQ=255)                                                                                                    gCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCa                                                                                                                                   <  2:391645/234‑1 (MQ=255)                                                                                                      ttGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTc                                                                                                                                                                                                                                        >  1:209455/1‑131 (MQ=255)                                                                                                      ttGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTc                                                                                                                                                                                                                                        <  2:209453/131‑1 (MQ=255)                                                                                                      ttGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTg                                                                                                                                                                                       >  1:664858/1‑180 (MQ=255)                                                                                                            gcgAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTACAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCAc                                                                                                                         <  1:86194/236‑1 (MQ=255)                                                                                                                 tGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCTAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTACAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGAGGGCGATGCGCGCAcc                                                                                                                                           >  2:86192/1‑213 (MQ=255)                                                                                                                 tGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGAc                                                                                                                     >  1:159352/1‑235 (MQ=255)                                                                                                                         acaaCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAagtcggcg                                                                                                                                                                        >  2:399286‑M2/1‑168 (MQ=255)                                                                                                                             cgcccgcAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTcc                                                                                                                                                            >  2:19227/1‑183 (MQ=255)                                                                                                                                  gcAGATCTTTAACTCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAagtcggcgccggcttcggcattgttcgaagagtttggcttcaccctgg                                                                                                                                >  1:449409‑M2/1‑159 (MQ=255)                                                                                                                                  gcAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCATGGTGAAGCCAAACTCTTCGAACAAGGCCGAAGCCGGCGCCGACTCACCGTTGGTGGTCATGCCGATGATACGACCTTCCAGCCCGACGTACTTGTACCAGAAGTCGGCGTGGGCACCTTCGATGACGATCCGCGCACCGACTCCCAGCGGCAGCACg                                                                                                                        <  2:567081/215‑1 (MQ=255)                                                                                                                                              aTCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGa                                                                                         <  2:862111/234‑1 (MQ=255)                                                                                                                                                     ttCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGCTACCACCTTCCAGGCCGACGTACTTg                                                                                                                                                                                       >  2:36103/1‑133 (MQ=255)                                                                                                                                                     ttCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGgcagc                                                                                                                           >  2:960171/1‑193 (MQ=255)                                                                                                                                                     ttCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGgcagc                                                                                                                           <  1:960174/193‑1 (MQ=255)                                                                                                                                                     ttCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTgg                                                                                >  1:256591/1‑236 (MQ=255)                                                                                                                                                      tCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGGCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGt                                                                               >  1:777100/1‑236 (MQ=255)                                                                                                                                                      tCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATgc                                                                                                                                                  >  2:470067/1‑169 (MQ=255)                                                                                                                                                      tCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCAcc                                                                                                                                           >  2:882763/1‑176 (MQ=255)                                                                                                                                                      tCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCgg                                                                                                                               <  2:56872/188‑1 (MQ=255)                                                                                                                                                              ctctTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTgcatgg                                                                         <  2:851590/234‑1 (MQ=255)                                                                                                                                                                 ttCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAACCTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGc                                                                                                                                 <  2:94819/175‑1 (MQ=255)                                                                                                                                                                   cGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTgcatggcatg                                                                     <  2:934433/233‑1 (MQ=255)                                                                                                                                                                           ccGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGACCACGCTGGTGCATGGCATGGagc                                                                 >  2:208714/1‑227 (MQ=255)                                                                                                                                                                           ccGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCAcgcg                                                          >  1:458503/1‑236 (MQ=255)                                                                                                                                                                            cggggATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTg                                                                              <  2:268195/212‑1 (MQ=255)                                                                                                                                                                                 aTGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTtctggtacaaggacgtcggcctggacggtcgtctcatcggcatgaccacctacggtgagtcggcgccggcttcg                                                                                                                                                               >  1:240369‑M1/1‑55 (MQ=255)                                                                                                                                                                                 aTGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGc                                                                                                          >  2:581791/1‑182 (MQ=255)                                                                                                                                                                                        ccAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTtctggtacaagtacgtcggcctggaaggtcgtatcatcggcatgaccacctacggtgagtcggcgccggcttcggcattgttcgaagagtttggcttcaccctggagaacatcctcggtactgccgaagagctgctggaagactgagttaaagatctgc                                                                          >  1:449409‑M1/1‑48 (MQ=255)                                                                                                                                                                                                    cAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGt                                                                                                     >  2:280286/1‑168 (MQ=255)                                                                                                                                                                                                    cAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCAcgcg                                                          >  1:956112/1‑211 (MQ=255)                                                                                                                                                                                                         tctTCGAACAATGCCGAAGCCGGCACCGACTtctggtacaagtacgtcggcctggaaggtcgtatcatcggcatgaccacctacggtgagtcggcgccggcttcggcatttg                                                                                                                                                        >  2:249677‑M1/1‑31 (MQ=255)                                                                                                                                                                                                         gctTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGgca                                                                                                                             <  2:188199/138‑1 (MQ=255)                                                                                                                                                                                                                caaatgCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAagtcggtgccggcttcggcattgttcgaaga                                                                                                                                                 >  2:249677‑M2/3‑81 (MQ=255)                                                                                                                                                                                                                    tGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTgcatggcatg                                                                     <  2:159350/184‑1 (MQ=255)                                                                                                                                                                                                                    tGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCACGCGCACCTTGCGGCCTTGCTCGGTCAGCTTg                              <  2:1074237/223‑1 (MQ=255)                                                                                                                                                                                                                     gCCGACGCCGGCGCCGCCTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGa                                                                                         <  2:327871/163‑1 (MQ=255)                                                                                                                                                                                                                      ccGAAGCCGGCGCCGACTCACCGTAGGTGGCCATGCCGATGATAGGTCCTTCTAGGCGGACg                                                                                                                                                                                             >  2:906653/1‑62 (MQ=255)                                                                                                                                                                                                                       cGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGAGACGACCGTCCAGGCCGACGTCCTTGTACCAGAagtcggcgccggcttcggcattgttcgaagagtttggcttcaccctggagaacat                                                                                                                         >  1:240369‑M2/1‑74 (MQ=255)                                                                                                                                                                                                                        gAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAgg                                                                                                           >  2:78474/1‑142 (MQ=255)                                                                                                                                                                                                                                cgcCGACTtctggtacaagtacgtcggcctggaaggtcgtatcatcggcatgaccacctacggtgagtcggcgccggcttcggcattgttcgaagagtttggcttcaccctggagaacatcctcggtactgccgaagagctgctggaagactgatttaaagatctgcgggcgttgt                                                                 >  2:399286‑M1/1‑8 (MQ=255)                                                                                                                                                                                                                                 gcCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGcc                                                                                                                                                                                                 <  2:604028/47‑1 (MQ=255)                                                                                                                                                                                                                                 gcCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGcc                                                                                                                                                                                                 >  1:604031/1‑47 (MQ=255)                                                                                                                                                                                                                                 gcCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCACGCGCACCTTGCGGCCTTGCTCGGTCAGCTTGTCGAAGGCCTGAACAGCCAGGCCCa     >  1:597040/1‑235 (MQ=255)                                                                                                                                                                                                                                    gACTtctggtacaagtacgtcggcctggaaggtcgtatcatcggcatgaccacctacggtgagtcggcgccggcttcggcattgttcgaagagtttggcttcaccctggagaacatcctcggtactgccgaagagctgctggaagactgatttaaagatctgcgggcggtgtcgccttcattcgcgggcaagcccgctcccccagaggctgcatgaaaccctgtgtgagcgggcg  >  1:284713‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                                     aCTtctgttacaagtacgtcggcctggaaggtcgtatcatcggcatgaccacctacggtgagtcggcgccggcttcggcattgttcgaagagtttggcttcaccctggagaacatcctcggtactgccgaagagctgctggaagactgatttaaagatctgcgggcggtgtcgccttcattcgcgggcaagcccgctcccacagaggttgca                        <  1:86329‑M1/212‑210 (MQ=255)                                                                                                                                                                                                                                      cTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCACGCGCACCTTGCGGCCTTGCTCGGTCAGCTTGTCGAAGGCCTGAACAGCCAg          <  1:17743/225‑1 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                        ACGAGACAGTTCAATTGTCGTCAGCCTGCGGAATTTGCGGTGTGGCATTCGCGGGCAAGCCCGCTCCCACAGGGTTTCATGCAACCTCTGTGGGAGCGGGCTTGCCCGCGAATGAAGGCGACACCGCCCGCAGATCTTTAAATCAGTCTTCCAGCAGCTCTTCGGCAGTACCGAGGATGTTCTCCAGGGTGAAGCCAAACTCTTCGAACAATGCCGAAGCCGGCGCCGACTCACCGTAGGTGGTCATGCCGATGATACGACCTTCCAGGCCGACGTACTTGTACCAGAAGTCGGCGTGGGCAGCTTCGATGGCGATGCGCGCACCGACTTCCAGCGGCAGCACGGACTGCTTGTAGGCAGCGTCCTGGGCATCGAACACGCTGGTGCATGGCATGGAAACCACGCGCACCTTGCGGCCTTGCTCGGTCAGCTTGTCGAAGGCCTGAACAGCCAGGCCCACTT  >  AE015451/5655555‑5656016

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.