New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 665680 =60 (1.040)3 (0.060) 3/322 NT 5.1% coding (2546/4902 nt) yfhM lipoprotein of unknown function
?AE015451 665839 = 55 (1.010)coding (2705/4902 nt) yfhM lipoprotein of unknown function

TGGGCGTGCTGCACCTGCCGCTGGACCGCGCCGAGCGCAAGCTTGCGCTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCTACGGTCGACATCCCCGA  >  AE015451/665608‑666046
                                                                                                                                                                                                                                       |                                                                                                                                                                                                               
tGGGCGTGCTGCACCTGCCGCTGGACCGCGCCGAGCGCAAGCTTGCGCTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGc                                                                                                                                                                                                              >  1:851041/1‑235 (MQ=255)
               tGCCGCTGGACCGCGCCGAGCGCAAGCTTGCGCTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTg                                                                                                                                                                                                      <  2:1065076/228‑1 (MQ=255)
                        aCCGCGCCGAGCGCAAGCTTGCGCTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCg                                                                                                                                                                                                   <  2:35485/222‑1 (MQ=255)
                               cGAGCGCAAGCTTGCGCTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGc                                                                                                                                                                               >  1:558356/1‑235 (MQ=255)
                                            gcgcTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAggc                                                                                                                                                                 >  1:54406/1‑236 (MQ=255)
                                               cTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCa                                                                                                                                                                                               >  1:623110/1‑203 (MQ=255)
                                                  aGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCg                                                                                                                                                                                                   <  1:472537/196‑1 (MQ=255)
                                                                 gagaAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCa                                                                                                                                             <  1:827161/235‑1 (MQ=255)
                                                                        TGCGCCCGAAACAGCCGTTGAAAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCagcctcgat                                                                                                                                     >  1:683035‑M1/1‑232 (MQ=255)
                                                                                AAACAGCCGTTGACAGGGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATg                                                                                                                                                                                                         >  2:153248‑M1/1‑160 (MQ=255)
                                                                                   cAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACa                                                                                                                                                                                       <  1:836433/175‑1 (MQ=255)
                                                                                        gTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATgcgg                                                                                                                     <  1:511367/236‑1 (MQ=255)
                                                                                                        aaGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAggcc                                                                                                                                                                >  1:532673/1‑177 (MQ=255)
                                                                                                        aaGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAggggg                                                                                                      <  1:551982/235‑1 (MQ=255)
                                                                                                             cgccAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATgcggc                                                                                                                    >  1:695465/1‑216 (MQ=255)
                                                                                                               ccAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCTAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAcgcg                                                                                               <  2:558353/235‑1 (MQ=255)
                                                                                                                 aaCGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGc                                                                                                                                                                               <  2:308060/153‑1 (MQ=255)
                                                                                                                    gCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCa                                                                                          <  1:547762/235‑1 (MQ=255)
                                                                                                                      cGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAac                                                                                        <  1:974213/235‑1 (MQ=255)
                                                                                                                                  gCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATc                                                                                                                                                                      >  1:196899/1‑145 (MQ=255)
                                                                                                                                            gTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAg                                                                                                 <  1:326503/204‑1 (MQ=255)
                                                                                                                                              gCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATgcggcg                                                                                                                   >  1:451556/1‑184 (MQ=255)
                                                                                                                                                aTGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAg                                                                        >  1:734644/1‑225 (MQ=255)
                                                                                                                                                 tgtgTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAg                                                                                                 <  1:857849/199‑1 (MQ=255)
                                                                                                                                                   tgttgttgtCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGc                                                                                                    <  2:851038/194‑1 (MQ=255)
                                                                                                                                                   tgttgttgtCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAg                                                                                                 <  2:750507/197‑1 (MQ=255)
                                                                                                                                                    gttgttgtCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACt                                                                                     <  1:457785/208‑1 (MQ=255)
                                                                                                                                                         tgtCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGc                                                                                                                                           <  2:811592/149‑1 (MQ=255)
                                                                                                                                                          gtCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCg                                                                                                                                                                     <  1:5066/122‑1 (MQ=255)
                                                                                                                                                          gtCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCg                                                                                                                                                                     >  2:5066/1‑122 (MQ=255)
                                                                                                                                                             ggcggTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGGTCGGGGGCGATgcg                                                                                                                      >  1:181015/1‑166 (MQ=255)
                                                                                                                                                                  tGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTg                                           >  1:517553/1‑236 (MQ=255)
                                                                                                                                                                     aCGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGga                                         >  1:748977/1‑235 (MQ=255)
                                                                                                                                                                       gTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGgacga                                      <  1:391236/236‑1 (MQ=255)
                                                                                                                                                                              tCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATgcg                                                                                                                      <  2:532670/149‑1 (MQ=255)
                                                                                                                                                                              tCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCg                                                                                               <  2:950942/172‑1 (MQ=255)
                                                                                                                                                                                cTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGc                                                                                                    <  2:430813/165‑1 (MQ=255)
                                                                                                                                                                                cTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGAcc                                                                                            <  2:997306/173‑1 (MQ=255)
                                                                                                                                                                                 tCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAg                            <  1:568035/236‑1 (MQ=255)
                                                                                                                                                                                  gccatcggcgttggcggcctttaccttcactgtcaacggctgtttcgggcgcaAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAac                                                                                        >  1:561904‑M2/54‑175 (MQ=255)
                                                                                                                                                                                  gccatcggcgttggcggcctttaccttcactgtcaacggctgtttcgggcgcaAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAac                                                                                        <  2:561901‑M2/122‑1 (MQ=255)
                                                                                                                                                                                         cccGATTCCAAAACCCCCGCCCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGc                                                                                                                                               <  2:286215/112‑1 (MQ=255)
                                                                                                                                                                                         aCCGATTCCAAAACCCCCGCCCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGc                                                                                                    <  1:532946/156‑1 (MQ=255)
                                                                                                                                                                                          ccGATTTCAAAACCCCCGCCCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAgg                                 <  1:46991/222‑1 (MQ=255)
                                                                                                                                                                                           cGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGa                             >  1:1057240/1‑225 (MQ=255)
                                                                                                                                                                                            ttggcggcctttaccttcactgtcaacggctgtttcgggcgcaAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTCACCATAGTCGCCcagca                                                              >  2:42748‑M2/44‑191 (MQ=255)
                                                                                                                                                                                            gATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCt                   >  2:950441/1‑234 (MQ=255)
                                                                                                                                                                                             aTTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGTCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCa                                                                           <  2:549821/177‑1 (MQ=255)
                                                                                                                                                                                             aTTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGc                                                                                                                                           >  2:359760/1‑113 (MQ=255)
                                                                                                                                                                                             aTTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGc                                                                                                                                           <  1:359763/113‑1 (MQ=255)
                                                                                                                                                                                                tCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCg                                                                                               <  2:428098/154‑1 (MQ=255)
                                                                                                                                                                                                  aaaaCCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGAcc                                                                                            <  1:518135/155‑1 (MQ=255)
                                                                                                                                                                                                  aaaaCCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGAcc                                                                                            >  2:518132/1‑155 (MQ=255)
                                                                                                                                                                                                  aaaaCCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGgacg                                       <  2:634170/208‑1 (MQ=255)
                                                                                                                                                                                                  aaaaCCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGgacg                                       >  1:634173/1‑208 (MQ=255)
                                                                                                                                                                                                  aaaaCCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCTACGGTCgc           >  1:1061870/1‑234 (MQ=255)
                                                                                                                                                                                                    accccccGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCTACGGt              <  1:23326/229‑1 (MQ=255)
                                                                                                                                                                                                            ccccGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCt                   <  2:864274/217‑1 (MQ=255)
                                                                                                                                                                                                             cccGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCTACGGTCGACATCCCCGa  <  2:751656/234‑1 (MQ=255)
                                                                                                                                                                                                                   cGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGCTGGCCAAGGGGGGCAAGCGACCCAACACTACGGGAACCATAGTCGCCcagca                                                              >  2:370553/1‑168 (MQ=255)
                                                                                                                                                                                                                    gCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGc                                                      <  2:589549/175‑1 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                               
TGGGCGTGCTGCACCTGCCGCTGGACCGCGCCGAGCGCAAGCTTGCGCTGAGCCTGCAGGCGCCGGAGAAAATGCGCCCGAAACAGCCGTTGACAGTGAAGGTAAAGGCCGCCAACGCCGATGGCAGTGTGCCCAAGCAGGTGCATGTGTTGTTGTCGGCGGTGGACGTGGGCATCCTCAACATCACCGATTTCAAAACCCCCGACCCGTTCGCCAGCCTGTTCGGGCGCAAGGCCTATGGTGCCGATCAACTGGACATCTACGGCCAGTTGATCGAGGCCGGCCAAGGCCGCCTGGCCAGCCTGGCGTTCGGTGGCGATGCGGCGATGGCCAAGGGGGGCAAGCGACCCAACACTACGGTAACCATAGTCGCCCAGCAGAGCCTGCCGGTGACGCTGGACGACAAGGGTGAGGGCCAGGCTACGGTCGACATCCCCGA  >  AE015451/665608‑666046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.